Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00739 ATGCAGGAACTTCCAGTTCATCAAAGAGCAGATGCTGTAAGCAGTCTGGTATATGAAACAAATGCGAGATTAAGAGAACCAGCTTATGGTTGTGTTGGAGTCCTATTGTACCTGGAAAACCAAGTCTTGAGCTTCAAATGCAGCAGCAGTGGCTCAAGCAGAGATACTGTGCATCGAGATGCAGCAGGTGCTAGCCAGCGATGCCAACCCCACAAATTCATGAGCCAGATGGAAAAACATATTTTGTCAACAACAGCTTCCCCCAGTACTTAA 273 0.4505 MQELPVHQRADAVSSLVYETNARLREPAYGCVGVLLYLENQVLSFKCSSSGSSRDTVHRDAAGASQRCQPHKFMSQMEKHILSTTASPST* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00739 90 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 62 - -
Pte18g00739 90 ProSiteProfiles LOB domain profile. 1 56 IPR004883 -
Pte18g00739 90 Pfam Lateral organ boundaries (LOB) domain 1 46 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00739 Pte-Chr18 18871331 18871603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00739 1 42 AS2 family AT2G30130 73.810 1.31e-18 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte18g00739 LOB 2.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00739 - - gmx:100812780 74.7146