Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00736 ATGGCAGCCGGTGATCAAGGTTCTAACTTCACTTCTTTCCAATTGGGTATCACTAGAAAGAGGAAAAGGAGTAGAAGACGAGAGGGTTCTAAATCTATATCTGAAACTTTAGCTGAGTGGAAAGCATACAATGACCGTATTGATGCTTGTTCTGATAAGCGTAAACCTAACCGTAAAGCTCCGGCCAAAGGTTCCAAGAAAGGTTGTATGAAAGGCAAAGGAGGGCCTGAGAATTTACTTTGTAAGTTCAGAGGCGTTAGGCAGAGGACATGGGGAAAATGGGTGGCTGAGATCAGAGAACCAAATAGGGGAAAAAGGCTATGGTTGGGTAGTTTTCCTTATGCGGTTGATGCTGCTGTTGCATATGATGAGGCTGCACGAGCTATGTATGGTGCCGACGCTCGTCTGAACTTCCCTAATGTCAAAGCTCGCAATTTGTATTCCCAATCTTTGAGGGGTACATTTCCTCATTCGACCATTTCAGGCTCTTCAACTGCCACTTCAGTTGTCTCAGTTTCAACTGGCGTATCTGAAGTTTGTGAGGCTGAGGATACGAAGATGAGGGTTGATTCAGCTTATGAGCGTTGTAGAGATGCAGGAAGTGAAGTCAATGAGTCTGAGTCCAGCTTTAGAGGGGAACCTGTCGAAGTTACCACTGGTAGAATTATCAAACAAGAGGTGAGAGAGGGGTTCGATGACGTGAAGGACTCGAAGCCTAGCTCTGGCCATGACTTAAAGGCATATGAAAGCCATGGCGTTGAAGCTTCGAATTATAATCTGCCTTGGGATGCAATGAATTTTGATTGGGATATGGGGGAAGATGATATCTTCCGAAACTTCTCTCAGGAGGAGATTTTTGATGTTCATGAACTTTTAGGTAGCATCGACAATGAACCTCTTGAGCCTATTGTAGGCTCCTCTTGCGACAATCAACTGTAG 939 0.4473 MAAGDQGSNFTSFQLGITRKRKRSRRREGSKSISETLAEWKAYNDRIDACSDKRKPNRKAPAKGSKKGCMKGKGGPENLLCKFRGVRQRTWGKWVAEIREPNRGKRLWLGSFPYAVDAAVAYDEAARAMYGADARLNFPNVKARNLYSQSLRGTFPHSTISGSSTATSVVSVSTGVSEVCEAEDTKMRVDSAYERCRDAGSEVNESESSFRGEPVEVTTGRIIKQEVREGFDDVKDSKPSSGHDLKAYESHGVEASNYNLPWDAMNFDWDMGEDDIFRNFSQEEIFDVHELLGSIDNEPLEPIVGSSCDNQL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00736 312 FunFam Ethylene-responsive transcription factor 2 81 140 - -
Pte18g00736 312 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Pte18g00736 312 CDD AP2 81 141 IPR001471 GO:0003700|GO:0006355
Pte18g00736 312 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Pte18g00736 312 PRINTS Ethylene responsive element binding protein signature 121 141 IPR001471 GO:0003700|GO:0006355
Pte18g00736 312 MobiDBLite consensus disorder prediction 1 17 - -
Pte18g00736 312 MobiDBLite consensus disorder prediction 1 33 - -
Pte18g00736 312 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 19 298 - -
Pte18g00736 312 MobiDBLite consensus disorder prediction 51 71 - -
Pte18g00736 312 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Pte18g00736 312 Gene3D AP2/ERF domain 81 141 IPR036955 GO:0003700|GO:0006355
Pte18g00736 312 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Pte18g00736 312 SUPERFAMILY DNA-binding domain 82 139 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00736 Pte-Chr18 18846704 18848973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00736 15 297 AP2-EREBP Transcription Factor Family AT2G40340 40.138 3.23e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte18g00736 AP2 2.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00736 - K09286 pcin:129294142 229.18