Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00724 ATGTCACCGGCCACCGGGATTGTTGCTCCACTCTTGCCTGACAGGAAAGCAGCTGATCAGACAGCATCAGTTTCTGGCGCTGTGTTCAATGTGGCCACGACTGTAATTGGTGCAGGAATTATGTCGATCCCAGCGACTCTGAAGGTTCTAGGTGTAATTCCAGCTTTTGTGCTCATTTTGATCATTGGCGTGCTGGCTGAAACATCAGTTGAGTTTCTCATGAGATTTACACATTCTGGTGAGACCACAACCTATGCCGGTGTCATGAAGGAGGCATTCGGACCGGTAGGCTCTATAGCGACGCAGGTCTGTGTCATGATCACAAATTTTGGCTGTTTGATTATGTACCTCATAATCATAGGGGATGTCCTTTCTGGGGTTCAATCAGACGATACGATTCACTTCGGGATTTTGCAAAAATGGTTTGGAACTCAATGGTGGACCTCCAGGGAATTTGCAGTCCTTCTCATCCTTGTGCTGATCCTTCTCCCATTAGTGCTTTTGCGTCGTGTAGAATCATTGAGCGTCACTTCAGCCATAGCCACACTCCTTGCGTTGGTGTTTGTTGGCATATGTTCTGCGTTGGCAATAGCTGCACTTGTCCGAGGAGAAACAGAGAGACCTAGGTTGTTTCCACGATTAAACCATCAGACCTCGTTCTTCGATCTATTCACTGCTATCCCAGTCATTGTTACAGCCTTCACGTTCCATTTCAATGTACATCCAATCGGGTTTGAGCTGAGCAGGCCTACAGATATGATAACAGCAGTGAGGATAGCATTGACACTTTGTGCAGCTATCTATTTTGCCGTAGGCTTGTTTGGGTACTTGCTGTTTGGTGATTCCATTCATTCAGACATACTTGTGAATTTTGATCAGAATGCAGGTTCCACAATCAGTTCCATGCTCAATGATTTAGTCCGGTTAAGCTATGCACTGCACATCGTCCTGGTGTTCCCACTGTTGAACTTTTCTTTAAGGGCCAACATAGATGAACTTCTTTTCCCTAAGAAGCCTCTTTTGGCAAATGACAACACACGATTTATGGGCCTCACTCTCGTGCTGCTAGTTCTCAGCTACCTTGCAGCCATTACATTCCCAGATTTATGGTTAATTTTTCAGTTTCTGGGTTGCACAACTGCAGTCTGCCTTGCCTTCATTTTCCCTGGTGCCATTGCTTTGAGGGATGCACTCAGTGTATCAACAAGAAAGGACAAGATCATAGGAGCTGTAATGATCCTGCTGGCAGTGGTAACAAGTGCAATTGCCATTGCCATCAACCTATACAATATTTTCAGCAGCAAAGTCTCTCTCCTCTGTGGCCTTCATTATCAGATCACCTCTGGCATGATAAGATCAAATTGA 1365 0.4535 MSPATGIVAPLLPDRKAADQTASVSGAVFNVATTVIGAGIMSIPATLKVLGVIPAFVLILIIGVLAETSVEFLMRFTHSGETTTYAGVMKEAFGPVGSIATQVCVMITNFGCLIMYLIIIGDVLSGVQSDDTIHFGILQKWFGTQWWTSREFAVLLILVLILLPLVLLRRVESLSVTSAIATLLALVFVGICSALAIAALVRGETERPRLFPRLNHQTSFFDLFTAIPVIVTAFTFHFNVHPIGFELSRPTDMITAVRIALTLCAAIYFAVGLFGYLLFGDSIHSDILVNFDQNAGSTISSMLNDLVRLSYALHIVLVFPLLNFSLRANIDELLFPKKPLLANDNTRFMGLTLVLLVLSYLAAITFPDLWLIFQFLGCTTAVCLAFIFPGAIALRDALSVSTRKDKIIGAVMILLAVVTSAIAIAINLYNIFSSKVSLLCGLHYQITSGMIRSN* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00724 454 PANTHER AMINO ACID TRANSPORTER 16 419 - -
Pte18g00724 454 Pfam Transmembrane amino acid transporter protein 21 432 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00724 Pte-Chr18 18670476 18674799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00724 1 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.908 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00724 - - qsa:O6P43_020133 623.624