Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00723 ATGACAATATGTGGGCTTGGGATTCAGAGAAGGGAAAGATATGATGAGATAGGGAAGAAGCTCAAGAGGGAAGGAGATGTGTCTTCTCAAATGGGACGAAGACACATGCTGGGTCCTCCTGGAACCCTAAATACAATTACACCATGTGCAGCCTGTAAGCTATTGAGACGAAGATGCGCTCAAGAGTGTCCCTTTTCTCCTTACTTCTCGCCTCATGAACCTCAGAAGTTTGCTTCTGTTCATAAAGTTTTCGGTGCTAGCAACGTCTCAAAGATGCTTATGGAAGTACCTGAGAGTCAAAGAGCTGATGCTGCTAACAGTCTTGTGTATGAGGCTAATGTGAGGTTAAGAGACCCAGTCTATGGCTGCATGGGTGCAATTTCAGCTTTGCAACAACAGGCTCAATCTTTACAGGCTGAGCTTAATGCAGTAAGAGCAGAAATCCTTAAGTACAAACTTAGGGAAGCTACTATGATACCATCATCTCATCAGGTTGCTTTGTTCTCTTGTTCCAGTGCTGTTTCGGTAGCTGCCCCTCCGCCACCAGCCCCAGCACCGCCTACTCCACCTCCACCACCTCCTATGACTTCAACTTCAACTTCTTCTTCTTCTACCTTGTACACGCAGCAGAATTCTGTCACTGATTATAGCACAATCTCAAGTGACCATGTTTCCTACTTTGGTTAA 687 0.4556 MTICGLGIQRRERYDEIGKKLKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQAQSLQAELNAVRAEILKYKLREATMIPSSHQVALFSCSSAVSVAAPPPPAPAPPTPPPPPPMTSTSTSSSSTLYTQQNSVTDYSTISSDHVSYFG* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00723 228 MobiDBLite consensus disorder prediction 198 212 - -
Pte18g00723 228 MobiDBLite consensus disorder prediction 178 197 - -
Pte18g00723 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 44 200 - -
Pte18g00723 228 ProSiteProfiles LOB domain profile. 47 148 IPR004883 -
Pte18g00723 228 Pfam Lateral organ boundaries (LOB) domain 48 145 IPR004883 -
Pte18g00723 228 Coils Coil 127 154 - -
Pte18g00723 228 MobiDBLite consensus disorder prediction 178 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00723 Pte-Chr18 18654403 18657414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00723 33 176 AS2 family AT2G40470 85.714 1.17e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte18g00723 LOB 1.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00723 - - ccaj:109797870 313.153