Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00720 ATGTCTATTCCAAATCGGAATGCTCCTCTAAGAGGTTCTTATCACCGCCGTGCACATTCCGAAGTACATTTTCGAATTCCCGACGACCTTGATCTGGACCCCGATTCATTAGACGTCCCTTTTGAGGATCTCGGATCAGAAGATGATCTTTTCTCAACCTATATGGATATTGAGAAGCTCGGATCCAAGCCTGAAGATGGACCTTTCGGATCTCCCATCAACAAATCCGAAAACAATAGCAACGTTGCACCCGCCAATGCTGCTGGTGGTGGCAGTAGTGCGCAGCTGGAGAATTGCGAGATTGAGAGAAACGGGAGACCCGGTCATTTTCGTAGTAATTCCAATGATGGGTATTCATCAATGGAGAGCATTGAGGCCAAGAAAGCCATGGCTCCTGATAAGCTCGCTGAATTGTGGACCGTTGATCCCAAGCGAGCGAAGAGGATCCTGGCTAATAGGCAATCTGCTGCCCGGTCAAAAGAGAGGAAAGCTCGTTACATGTTAGAACTTGAGAGAAAAGTTCAAACCCTTCAAACAGAAGCAACCACTCTTTCTGCTCAATTACACCTTTTCCAGAGAGATACAACTGGCTTGACTACCGAAAATACAGAGCTTAAGCTTCGTTTACAAGCTATGGAGCAACAAGCTCAGTTACGTGATGCTCTTAATGAAGCATTAAAGAAAGAAGTTGAGAGGCTAAAAATTGCTACTGGAGAGGCTATGACTCCTGCTGACACTTTCAGTTTGGGGATGCACGAAGTCCCATTTAGCCAGACTTCCTTTTTGCATCAACCACAGCATGGTCTAGGTGAAGCCCCAAATACACAAAGGCAGCAGTTTCATCCCTTTGTCTCTAACATGTCAAGTCCTCATCAGCCTTTACTTGCCAACTCACATGACTTGTCAGAAATGATGCAGTGCGATCCCATTGGCCAATTTCAAGGGCTTGAGATAAGCACCCGTGGCTCACACATTATGAGATCTGAAGGCCCGTCGACATGCAGTAATGCATTTGAATGCAAAACATACTGA 1032 0.4583 MSIPNRNAPLRGSYHRRAHSEVHFRIPDDLDLDPDSLDVPFEDLGSEDDLFSTYMDIEKLGSKPEDGPFGSPINKSENNSNVAPANAAGGGSSAQLENCEIERNGRPGHFRSNSNDGYSSMESIEAKKAMAPDKLAELWTVDPKRAKRILANRQSAARSKERKARYMLELERKVQTLQTEATTLSAQLHLFQRDTTGLTTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGEAMTPADTFSLGMHEVPFSQTSFLHQPQHGLGEAPNTQRQQFHPFVSNMSSPHQPLLANSHDLSEMMQCDPIGQFQGLEISTRGSHIMRSEGPSTCSNAFECKTY* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00720 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 142 205 IPR004827 GO:0003700|GO:0006355
Pte18g00720 343 SMART brlzneu 140 204 IPR004827 GO:0003700|GO:0006355
Pte18g00720 343 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 301 - -
Pte18g00720 343 FunFam probable transcription factor PosF21 143 196 - -
Pte18g00720 343 MobiDBLite consensus disorder prediction 59 94 - -
Pte18g00720 343 Coils Coil 208 239 - -
Pte18g00720 343 Gene3D - 143 196 - -
Pte18g00720 343 MobiDBLite consensus disorder prediction 72 94 - -
Pte18g00720 343 Pfam bZIP transcription factor 144 194 IPR004827 GO:0003700|GO:0006355
Pte18g00720 343 SUPERFAMILY Leucine zipper domain 144 195 IPR046347 GO:0003700|GO:0006355
Pte18g00720 343 Coils Coil 160 187 - -
Pte18g00720 343 CDD bZIP_plant_RF2 145 194 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00720 Pte-Chr18 18616169 18619556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00720 8 338 bZIP Transcription Factor Family AT2G40620 55.618 1.16e-107 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte18g00720 bZIP_1 2.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00720 - - qsa:O6P43_020104 435.261