Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00714 ATGACTTTCAAGCGGAGGAATGGAGGACGCAACAAACACGGTCGTGGACATGTCAATTTCATTCGCTGCTCTAACTGCGGCAAATGCTGCCCCAAGGACAAGGCCATCAAGAGGTTCCTTGTGAGGAACATTGTTGAGCAAGCTGCAGTGAGAGACGTCCAAGAAGCTTGTGTCTATGAACAGTACACACTTCCGAAGCTATATGTGAAGATGCAGTATTGTGTCTCGTGTGCCATTCACTCTCATGTTGTGAGGGTTCGCTCTCGCACTGACAGGAGAAAACGTGAGCCACCGCAGCGTTTCATCAGGCGCAAGGAGGATGCGCCAAGGCCTGGTCAGCCTGGACAAGCTCCTCGTCCTGCTGTCATAGCTCCTCCCCGTGCCTAA 387 0.5245 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRKEDAPRPGQPGQAPRPAVIAPPRA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00714 128 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte18g00714 128 FunFam 40S ribosomal protein S26 1 114 - -
Pte18g00714 128 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte18g00714 128 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte18g00714 128 MobiDBLite consensus disorder prediction 86 128 - -
Pte18g00714 128 MobiDBLite consensus disorder prediction 113 128 - -
Pte18g00714 128 MobiDBLite consensus disorder prediction 90 110 - -
Pte18g00714 128 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00714 Pte-Chr18 18564439 18566704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00714 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 87.069 1.35e-71 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00714 K02976 - gmx:100808790 218.009