Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00709 ATGTCACCGGCCACCGGGATTGTTGCTCCACTCTTGCCTGACAGGAAAGCAGCTGATCAGACAGCATCAGTTTCTGGCGCTGTGTTCAATGTGGCCACGACTGTAATTGGTGCAGGAATTATGTCGATCCCAGCGACTCTGAAGGTTCTAGGTGTAATTCCAGCTTTTGTGCTCATTTTGATCATTGGCGTGCTGGCTGAAACATCAGTTGAGTTTCTCATGAGATTTACACATTCTGGTGAGACCACAACCTATGCCGGTGTCATGAAGGAGGCATTCGGACCGGTAGGCTCTATAGCGACGCAGGTCTGTGTCATGATCACAAATTTTGGCTGTTTGATTATGTACCTCATAATCATAGGGGATGTCCTTTCTGGGGTTCAATCAGACGATACGATTCACTTCGGGATTTTGCAAAAATGGTTTGGAACTCAATGGTGGACCTCCAGGGAATTTGCAGTCCTTCTCATCCTTGTGCTGATCCTTCTCCCATTAGTGCTTTTGCGTCGTGTAGAATCATTGAGCGTCACTTCAGCCATAGCCACACTCCTTGCGTTGGTGTTTGTTGGCATATGTTCTGCGTTGGCAATAGCTGCACTTGTCCGAGGAGAAACAGAGAGACCTAGGTTGTTTCCACGATTAAACCATCAGACCTCGTTCTTCGATCTATTCACTGCTATCCCAGTCATTGTTACAGCCTTCACGTTCCATTTCAATGTACATCCAATCGGGTTTGAGCTGAGCAGGCCTACAGATATGATAACAGCAGTGAGGATAGCATTGACACTTTGTGCAGCTATCTATTTTGCCGTAGGCTTGTTTGGGTACTTGCTGTTTGGTGATTCCATTCATTCAGACATACTTGTGAATTTTGATCAGAATGCAGGTTCCACAATCAGTTCCATGCTCAATGATTTAGTCCGGTTAAGCTATGCACTGCACATCGTCCTGGTGTTCCCACTGTTGAACTTTTCTTTAAGGGCCAACATAGATGAACTTCTTTTCCCTAAGAAGCCTCTTTTGGCAAATGACAACACACGATTTATGGGCCTCACTCTCGTGCTGCTAGTTCTCAGCTACCTTGCAGCCATTACATTCCCAGATTTATGGTTAATTTTTCAGTTTCTGGGTTGCACAACTGCAGTCTGCCTTGCCTTCATTTTCCCTGGTGCCATTGCTTTGAGGGATGCACTCAGTGTATCAACAAGAAAGGACAAGATCATAGGAGCTGTAATGATCCTGCTGGCAGTGGTAACAAGTGCAATTGCCATTGCCATCAACCTATACAATATTTTCAGCAGCAAGTAA 1308 0.4541 MSPATGIVAPLLPDRKAADQTASVSGAVFNVATTVIGAGIMSIPATLKVLGVIPAFVLILIIGVLAETSVEFLMRFTHSGETTTYAGVMKEAFGPVGSIATQVCVMITNFGCLIMYLIIIGDVLSGVQSDDTIHFGILQKWFGTQWWTSREFAVLLILVLILLPLVLLRRVESLSVTSAIATLLALVFVGICSALAIAALVRGETERPRLFPRLNHQTSFFDLFTAIPVIVTAFTFHFNVHPIGFELSRPTDMITAVRIALTLCAAIYFAVGLFGYLLFGDSIHSDILVNFDQNAGSTISSMLNDLVRLSYALHIVLVFPLLNFSLRANIDELLFPKKPLLANDNTRFMGLTLVLLVLSYLAAITFPDLWLIFQFLGCTTAVCLAFIFPGAIALRDALSVSTRKDKIIGAVMILLAVVTSAIAIAINLYNIFSSK* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00709 435 PANTHER AMINO ACID TRANSPORTER 16 419 - -
Pte18g00709 435 Pfam Transmembrane amino acid transporter protein 21 432 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00709 Pte-Chr18 18381823 18384928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00709 1 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.908 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00709 - - qsa:O6P43_020133 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00709 18 18381823 18384928 Pte18g00709 18 18381823 18384928 RCT