Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00707 ATGCTCATGGAAGTACCTGAGAGTCAAAGAGCTGATGCTGCTAACAGTCTTGTGTATGAGGCAAATGTGAGGTTAAGAGACCCAGTCTATGGCTGCATGGGTGCAATTTCAGCTTTGCAACAACAGGCTCAATCTTTACAGGCTGAGCTTAATGCAGTAAGAGCAGAAATCCTTAAGTACAAACTTAGGGAAGCTACTATGATACCATCATCTCATCAGGTTGCTTTGTTCTCTTGTTCCAGTGCTGTTTCGGTAGCTGCCCCTCCTCCACCAGCCCCAGCACCGCCTACTCCACCTCCACCACCTCCTATTACTTCAACTTCAACTTCTTCTTCTTCTACCTTGTACACGCAGCAGAATTCTGTCACTGATTATAGCACAATCTCAAGTGACCATGTTTCCTACTTTGGTTAA 414 0.4541 MLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQAQSLQAELNAVRAEILKYKLREATMIPSSHQVALFSCSSAVSVAAPPPPAPAPPTPPPPPPITSTSTSSSSTLYTQQNSVTDYSTISSDHVSYFG* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00707 137 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 101 - -
Pte18g00707 137 Coils Coil 36 63 - -
Pte18g00707 137 ProSiteProfiles LOB domain profile. 1 57 IPR004883 -
Pte18g00707 137 MobiDBLite consensus disorder prediction 107 121 - -
Pte18g00707 137 MobiDBLite consensus disorder prediction 86 106 - -
Pte18g00707 137 MobiDBLite consensus disorder prediction 83 121 - -
Pte18g00707 137 Pfam Lateral organ boundaries (LOB) domain 1 54 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00707 Pte-Chr18 18373926 18374489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00707 1 85 AS2 family AT2G40470 79.545 3.42e-34 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte18g00707 LOB 7.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00707 - - qsa:O6P43_014818 154.066