Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00700 ATGGCTTCTGGGTCAGTTGCTTCACCTTCTTCATCACGCAATAGGCGTATGGACAATGGGGACGTGCCCCATGTTTTAGCTGTGGATGACAGCCTCATTGATCGCAAACTTGTGGAGAAGCTGTTAAGGAATTCTTCTTGCAAAGTCACGACAGCAGAAAATGGACCAGAGGCATTGGAGTTCTTAGGGCTGGGAAATACGGGAGATCAAAGCAGTCTGAATGATAGTGGATCAAAAGTGAATTTGATTATCACGGATTACTGCATGCCAGGGATGACAGGCTATGAGCTACTCAAGAGGATCAAGCAATCATCAGAAATGAGGGAAGTTCCAGTTGTGGTTATGTCTTCAGAGAATACCCCAACTCGAGTGAATAAGTGTTTAGCTGAAGGAGCAGAAATGTTCATCCAAAAGCCCCTCAAGCAATCAGATGTGAACAGATTAACATATCAGTTGCTCATGAATGGATGA 471 0.4437 MASGSVASPSSSRNRRMDNGDVPHVLAVDDSLIDRKLVEKLLRNSSCKVTTAENGPEALEFLGLGNTGDQSSLNDSGSKVNLIITDYCMPGMTGYELLKRIKQSSEMREVPVVVMSSENTPTRVNKCLAEGAEMFIQKPLKQSDVNRLTYQLLMNG* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00700 156 SUPERFAMILY CheY-like 23 150 IPR011006 -
Pte18g00700 156 Gene3D - 21 155 - -
Pte18g00700 156 ProSiteProfiles Response regulatory domain profile. 24 153 IPR001789 GO:0000160
Pte18g00700 156 CDD REC_typeA_ARR 25 148 - -
Pte18g00700 156 MobiDBLite consensus disorder prediction 1 22 - -
Pte18g00700 156 MobiDBLite consensus disorder prediction 1 16 - -
Pte18g00700 156 SMART REC_2 23 149 IPR001789 GO:0000160
Pte18g00700 156 Pfam Response regulator receiver domain 25 145 IPR001789 GO:0000160
Pte18g00700 156 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 149 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00700 Pte-Chr18 18202891 18204547 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00700 24 153 Response Regulator Gene Family AT3G56380 70.229 1.05e-61 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte18g00700 Response_reg 3.1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00700 K14492 - gmx:100499827 216.468