Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00693 ATGCTCAAGCGTGGAACGAGAACACTGGCTCCATCTCTACTGCTCACTGTGAGAATGCTATCATCTTCGCCATCGTCTTCTTCAACTAGCTGTAAAACCAAACTGTCTGTGACTGCTAAACCCACTTCATCTTCTATTTACAGAGCCCCTTTTGTTCAACTTCATAATCTCTTTCCCAATTCTCACTTTATTAACCTTAAAGCGATGGCCCTATCTAGATGCTTCTCTGGACTCTCTGATCCTATTGCGGTTGCAGTTAAAACAGAGATGAAAAACCCAGAACCAGAATGCGACGATTTTCTGTCTCTTGTTGTCGTGTCTTTTTACAAGTTCGCGGATTTTCCTGACCATGCTAAGATGCGGAAGCCACTGAAGGAGCTCTGTCAACAATTGCGTGTTTCAGGTGGTATAATTCTTGCACCAGAAGGAATTAACGGCAGCATATGTGGAACCCAGAAATCTGTGGAAACAGTTCTTGGTTTCATTCAAAGTGATCACCGTCTACAGGGACTAAGACAAGTTGAATCCCCCGTGAGTCCTGAGGAAGAAGCAATTCATCATGGACACTCTGCCAGCTCCCCTCTTGCTGCTGGGGAAGATGCACCTTTTAGATGGGATCATGTGAGGATTAAGTTGAAGAAAGAGATTGTGTCTCTTGGGATGCCTAGTGTTTCACCTATTGAAAGGGTTGGAAAGTATGTCAGCCCAAAGGATTGGAATGAACTGATCAGTGACCCAAATACAGTGGTTATTGATGTTCGCAATGATTATGAGACTAGAATTGGGAAGTTCAAAGGGGCAGTTGATCCATGCACTAGATCATTTCGAGAGTTCCCTTCTTGGGTGGAGGATCGTCTCCAAATCCCTGGGCAAGATAACCAGCATTCAGAATCTGAGAAAAGAAACAGCGATGAAACTGTAAGAGAACAAAAACAGCAGACGCCACGTGTTGCGATGTATTGCACAGGAGGTATCCGATGTGAGAAAGCTACAAGTTTCCTTCTTGGCAAAGGTTTCAAAGAGGTGTATCACTTGGAAGGAGGAATTCTGAAATACTTGGAGGAAGTCCCCAGGACTGAGAGCCTTTGGGAGGGTGAGTGCTTTGTGTTCGACAAACGAGTCTCTGTTGAGCACGGGTTGGTACAGGGGAATTTCAAGCTTTGCTATGGTTGCAAGGAGCCCATTAGTGATGCAGACATGGAAGCTCCGGAGTTTGAATATGGTGTTTCGTGTCCTCATTGTTTTGCATCGAAAACAGAAGAAGAGAAAGAGAGGGCACGAGCTAGGCAAAGGCAGTTTGAAACATGGGGTATCATAGGTGGTCCTGACAAAGGTCGCAAACAGGAGAGTGTTAACAAGCAAAGTTGA 1368 0.4496 MLKRGTRTLAPSLLLTVRMLSSSPSSSSTSCKTKLSVTAKPTSSSIYRAPFVQLHNLFPNSHFINLKAMALSRCFSGLSDPIAVAVKTEMKNPEPECDDFLSLVVVSFYKFADFPDHAKMRKPLKELCQQLRVSGGIILAPEGINGSICGTQKSVETVLGFIQSDHRLQGLRQVESPVSPEEEAIHHGHSASSPLAAGEDAPFRWDHVRIKLKKEIVSLGMPSVSPIERVGKYVSPKDWNELISDPNTVVIDVRNDYETRIGKFKGAVDPCTRSFREFPSWVEDRLQIPGQDNQHSESEKRNSDETVREQKQQTPRVAMYCTGGIRCEKATSFLLGKGFKEVYHLEGGILKYLEEVPRTESLWEGECFVFDKRVSVEHGLVQGNFKLCYGCKEPISDADMEAPEFEYGVSCPHCFASKTEEEKERARARQRQFETWGIIGGPDKGRKQESVNKQS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00693 455 Hamap tRNA uridine(34) hydroxylase [trhO]. 101 398 IPR020936 -
Pte18g00693 455 SMART rhod_4 234 358 IPR001763 -
Pte18g00693 455 MobiDBLite consensus disorder prediction 175 197 - -
Pte18g00693 455 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 213 387 IPR036873 -
Pte18g00693 455 Gene3D - 96 217 - -
Pte18g00693 455 Gene3D - 218 395 IPR036873 -
Pte18g00693 455 MobiDBLite consensus disorder prediction 294 311 - -
Pte18g00693 455 Pfam UPF0176 acylphosphatase like domain 104 216 IPR040503 -
Pte18g00693 455 CDD RHOD_YceA 231 354 - -
Pte18g00693 455 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Pte18g00693 455 Pfam Rhodanese-like domain 235 354 IPR001763 -
Pte18g00693 455 MobiDBLite consensus disorder prediction 286 314 - -
Pte18g00693 455 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 101 430 IPR020936 -
Pte18g00693 455 ProSiteProfiles Rhodanese domain profile. 244 361 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00693 Pte-Chr18 17958216 17961764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00693 99 447 Sulfurtransferasese or Rhodanese AT2G40760 76.056 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00693 - - minc:123227435 620.542