Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00685 ATGATTTTCACAATGTACAGTATTAGAGGAATACTCATGAAGCCCCAGTCTTCATTTGCTGCACTTTCATGTCTACTTCTTGTACTGTTCGAGTTTCAGTTCGTCGTAGCAGATCTGAACTCTGACGGCCAAGCGCTCCTTGACTTTGTTTCTTCTGTTCCACACGGACGAAAACTCAACTGGGATGCTTCTTCTCCAATCTGCACTTCTTGGTTCGGTGTCACCTGCAACTCGAATGGAACTCGTGTCATCTCTATCCGTCTTCCTGGCATTGGACTCATAGGCTCCATCCCGGAAAACACAATAGGCAAACTAGATGCTCTAAGGGTCTTGAGCCTTCGTTCCAACTACCTCACTGGAACTCTGCCTTCTGACATTCCCTCCATTCCTTCCCTCCAATTTCTTTATCTTCAATACAATAGCCTTTCTGGTCCATTCCCTTCTTCTCTCTCCCCTACTCTCATTGCAGTAGATCTTTCCGGCAACTCCTTCTCAGGAAATATCCCAACTGCGTTACAGTCTCTGAGGCGACTCACTTGGTTAAACCTCCAAAACAATTCTTTCTCTGGAGCCATCCCTGTGATTGACTTGCCAAGACTCAAGTTTCTGAACTTGAGTAACAACAATCTCAACGGCTCAATTCCAAATGTCCTGCAAAAATACCCAAGTTCTTCTTTCATGGGGAATTCTCTCTTATGTGGCCCTCCTCTCAAGAACTGTTCATCAATATCAACCTCTCCTGCACCGTCCCCTTCACCTACATATCAGCCATCGTCACCATCAAACTCCCCATTTCAGAATTCTGACCCTGCAAAAAAGTTTGGCCTAGGTTCTATACTTGCTCTAGCAATTGGAGGGTTCGCATTCATTGGTCTTTTAGTTGTGGTCTTCTCTGTCTGCTGTTTGAAGAGGAGAAAAAGGGAAAAAACTATAACAGTCAAGGGAAAGTCCAGTCTCACTGCAAAAACACTGAATCCGAAAGATTTTAGCAGTGCGGTACAAGACGCAGAGAAGAACAAACTGACTTTCTTTGAGGACTGCCCTTATAGCTTTAACCTTGAGGATCTGCTAAGGGCATCAGCTGAAGTTTTAGGGAAGGGGAGTTATGGAACAGCATACAAGGCTGTCTTGGAAGATGGGACGGCTGTTCTGGAACTTTCAGTGAAAAGGTTGAGGGAAGTAGCTGTTAGCAAAAAGGAGTTTGAGCAACAAATGGAGATGGTAGAAAGGGTTGGACATCACCCACATGTTGTCCCACTTCGTGCTTATTATTATTCCAAGGATGAGAAACTGTTGGTGTACAACTACATGCCTGGCGGGAGCCTGTTTACTCTGTTACACGGAAACAGGGGTGCTGGAAGAACCCCACTAGATTGGGAGTCTAGGATGAAAATCATGCTTGGAACAGGCAAAGGAGTTGCTTTCATCCATTCTGAAGGGGGACCGAAATTCACTCATGGCAATATAAAGTCTTCCAACGTGCTTATAACCCAAGATCTTGACGGTTCCCTTACTGATGTTGGATTGGCTCCATTGATGAATTTCCCTACAACAAAGACTCGTATCACTGGATACCGTGCTCCGGAAGTAACAGAAGCCAAGAAGATCACTCACAAATCTGATGTTTACAGCTTTGGCGTACTTCTCCTTGAAATGCTGACAGGTAAAACCCCTTTGCAGTATCCAGGGTACGATGATGTCGTTGATCTCCCAAGATGGGTGAGGTCTGTTGTTCGCGAGGAGTGGACTGCTGAAGTTTTTGATGTTGAGCTTTTGAGGGGGCGTTATGTTGAGGAGGAAATGGTGCAGATGCTTCAGATTGCGTTGGCATGTGTGGTGAGGGTACCGGACATGCGTCCTACGATGGACCAAGTTGTTAAAATGATAGAGGAAGTTCGACAACCTGAGTTGAAGAACCGAACATCCTCAGAATCTGAGTCAAATTTGCAGACACCGTGA 1959 0.4538 MIFTMYSIRGILMKPQSSFAALSCLLLVLFEFQFVVADLNSDGQALLDFVSSVPHGRKLNWDASSPICTSWFGVTCNSNGTRVISIRLPGIGLIGSIPENTIGKLDALRVLSLRSNYLTGTLPSDIPSIPSLQFLYLQYNSLSGPFPSSLSPTLIAVDLSGNSFSGNIPTALQSLRRLTWLNLQNNSFSGAIPVIDLPRLKFLNLSNNNLNGSIPNVLQKYPSSSFMGNSLLCGPPLKNCSSISTSPAPSPSPTYQPSSPSNSPFQNSDPAKKFGLGSILALAIGGFAFIGLLVVVFSVCCLKRRKREKTITVKGKSSLTAKTLNPKDFSSAVQDAEKNKLTFFEDCPYSFNLEDLLRASAEVLGKGSYGTAYKAVLEDGTAVLELSVKRLREVAVSKKEFEQQMEMVERVGHHPHVVPLRAYYYSKDEKLLVYNYMPGGSLFTLLHGNRGAGRTPLDWESRMKIMLGTGKGVAFIHSEGGPKFTHGNIKSSNVLITQDLDGSLTDVGLAPLMNFPTTKTRITGYRAPEVTEAKKITHKSDVYSFGVLLLEMLTGKTPLQYPGYDDVVDLPRWVRSVVREEWTAEVFDVELLRGRYVEEEMVQMLQIALACVVRVPDMRPTMDQVVKMIEEVRQPELKNRTSSESESNLQTP* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00685 652 MobiDBLite consensus disorder prediction 243 267 - -
Pte18g00685 652 SUPERFAMILY Protein kinase-like (PK-like) 362 636 IPR011009 -
Pte18g00685 652 Gene3D Phosphorylase Kinase; domain 1 325 436 - -
Pte18g00685 652 SUPERFAMILY L domain-like 52 238 - -
Pte18g00685 652 FunFam pollen receptor-like kinase 1 327 436 - -
Pte18g00685 652 PANTHER OS05G0588300 PROTEIN 19 644 - -
Pte18g00685 652 CDD STKc_IRAK 364 631 - -
Pte18g00685 652 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Pte18g00685 652 Gene3D Transferase(Phosphotransferase) domain 1 437 651 - -
Pte18g00685 652 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 437 643 - -
Pte18g00685 652 Gene3D Ribonuclease Inhibitor 195 241 IPR032675 -
Pte18g00685 652 ProSiteProfiles Protein kinase domain profile. 358 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00685 652 FunFam Probable inactive receptor kinase RLK902 39 196 - -
Pte18g00685 652 Gene3D Ribonuclease Inhibitor 39 194 IPR032675 -
Pte18g00685 652 Pfam Leucine Rich Repeat 199 220 IPR001611 GO:0005515
Pte18g00685 652 Pfam Protein kinase domain 361 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00685 Pte-Chr18 17896022 17899465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00685 3 633 Receptor kinase-like Gene Family AT5G58300 58.019 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte18g00685 Pkinase 9.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00685 - - qsa:O6P43_014864 856.67