Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00671 ATGGGTGAGGTTGTGGTGAGTAGCGGGGATTTAGGTGTGAAGATGCTGGAAGGTGAAGCAGACATTGAGGAGAGAGAGAAGGCAGAGGAAGGGAGTGTTGTTGCGAAGAAAGGTGGTGAGTCAAGTGGATTGATGATCATGTGGGAGAAGTTCTTACAAAGAAGGATGCTGAGGGTCTTATTGGTTGAAGCGGATGATTCCACCAGGCAAATTATAGCTGCTTTACTTAGGAAATGCAGTTACAGAGTGGCTGCTGTTTCTGATGGGTTAAAAGCATGGGACATACTGAAGGGTAGACCACACAACATTGATTTCATTTTAACGGAGGTGGAGTTGCCAGCAATATCCGGATATGCACTTCTCACTTTAATAATGGAGCATGAGATCTGCAAAAACATTCCAGTCATAATGATGTCATCACATGATTCAATCAGCACAGTCTACAATTGCATGTTAAGAGGTGCTGCTGACTATCTTGTCAAGCCTATTAGGAAAAATGAGCTGAGGAACTTGTGGCAGCATGTTTGGAGAAGACAAACTTCACTGGCTGGCTTAAAAGGCCCCCAATATGAGAGTGTTGCACAACAGAAGGTTGAAGCGACCGCTGAGAATGATGCTGCAAGCAATCATTCTAGTGGTGAAGATAAGCAATTCATTGAAAAAGGGAATGAAGCGCAGAGCTCTTGTACAAAGCCTGATGTGGAAGTTGAGATTGCTCCTATTAAAGATTTTGAGGAATTTACTCAAACGAAGTGCAATACACAATATGTGAGTGAGAATAATGTGGTAGAGAATGAAGTATGTATCAACTTAGGCTGGAAAGAAATCATGCCCAGCAGACAAGCTGTAGGATTAGCTATTGCCATCTGCAAGAATAGTGAATCTGGTGTTGGAAGAGCCTTTGATTTGGGATATCACAAGTCAAAGGCCGACAACCTAGATGAGGCATGTGGCAATAAGGCCACTGACTTGAATGCAGCATTCCCTACTTATCCCAACTGCAACGTCAAAAATCTTCCCTCATCTAGTGGAACAGAAAAGAATGATACATACCCAAAGCTGGATCTTTCCTTGAGAAGACCTCAATCCCACCTTGTTGAGAATAAAGTCATTGAAGAGAGAAACACAATCATACATTCCAATGCCTCAGCATTCAGGAGGTACAGCCAGAGGCAAATGCAAACCTCACCTACAGCGAAACAACAAATAGAATGTGGAGCATATTTTGAGAAGAACGTATCCGACATGGTTACTGGTTGTCACTCTGAAACTTCAGCGCCTAGTTTGGGAAGAAGTTTTTCTCCTGTCACTGCACAGTTGAAAGAGTCTGATATAGCTACTTCACAACTTCAACAGCGAGCGCATCCCATTCCTGTTCCAGTGGGAACTAGATACAACAACCTCTGCCAAGCCTATGGCTCTCTACGTACAATGTTTTGTACGCAATCAAACCCCCAACCAGTGCCAAGTCCAAGTTCAGCTGATCACCCGGAACACTCCCTACCAGCTAATATGTTTTACCATTCAAATATTGAAGATCATAATTCATCTAAGCTATACAGGACTCATGGTCAATATGCAAGAAATGACAATGATCCGAGCATGCAAAAGCAAGATCAAAGACTGGAATCTATTGAAGATCAAGGACGTGTTTCTACTGCCACTGAACAAAGTGCATGCAGTGGTGTCCGTGATAGTACTTTGAGCCATCTTGACAGCATTGGATATGGAAGCAACTTTGGAAGCAGTAGTAAAGTTGATCAGGTTCCTGCTGTCGTGGAAGGTTCCGAGAGCAAAACTGAAGACTTGACAAATCTTGGATTCTCGCAACAATCTGTTCTAAGAGAAGCGGCTCTAATAAAGTTCCGCATGAAAAGGAAAGAGAGGTGCTATGGAAAGAAGGTTCGGTATGAGAGCAGAAAAAAACTTGCAGAGCAACGTCCCAGAGTTAAAGGACAATTTGTTCGTCAAGGGCACTCTAATGTCCAGCCTACGGAAAATAATGGTGATAAAATGATTGGCTAG 2025 0.4301 MGEVVVSSGDLGVKMLEGEADIEEREKAEEGSVVAKKGGESSGLMIMWEKFLQRRMLRVLLVEADDSTRQIIAALLRKCSYRVAAVSDGLKAWDILKGRPHNIDFILTEVELPAISGYALLTLIMEHEICKNIPVIMMSSHDSISTVYNCMLRGAADYLVKPIRKNELRNLWQHVWRRQTSLAGLKGPQYESVAQQKVEATAENDAASNHSSGEDKQFIEKGNEAQSSCTKPDVEVEIAPIKDFEEFTQTKCNTQYVSENNVVENEVCINLGWKEIMPSRQAVGLAIAICKNSESGVGRAFDLGYHKSKADNLDEACGNKATDLNAAFPTYPNCNVKNLPSSSGTEKNDTYPKLDLSLRRPQSHLVENKVIEERNTIIHSNASAFRRYSQRQMQTSPTAKQQIECGAYFEKNVSDMVTGCHSETSAPSLGRSFSPVTAQLKESDIATSQLQQRAHPIPVPVGTRYNNLCQAYGSLRTMFCTQSNPQPVPSPSSADHPEHSLPANMFYHSNIEDHNSSKLYRTHGQYARNDNDPSMQKQDQRLESIEDQGRVSTATEQSACSGVRDSTLSHLDSIGYGSNFGSSSKVDQVPAVVEGSESKTEDLTNLGFSQQSVLREAALIKFRMKRKERCYGKKVRYESRKKLAEQRPRVKGQFVRQGHSNVQPTENNGDKMIG* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00671 674 ProSiteProfiles CCT domain profile. 615 657 IPR010402 GO:0005515
Pte18g00671 674 MobiDBLite consensus disorder prediction 642 674 - -
Pte18g00671 674 PANTHER TWO-COMPONENT RESPONSE REGULATOR 57 335 IPR045279 GO:0009736
Pte18g00671 674 SUPERFAMILY CheY-like 55 183 IPR011006 -
Pte18g00671 674 MobiDBLite consensus disorder prediction 199 224 - -
Pte18g00671 674 Pfam CCT motif 615 657 IPR010402 GO:0005515
Pte18g00671 674 CDD psREC_PRR 59 162 - -
Pte18g00671 674 MobiDBLite consensus disorder prediction 525 558 - -
Pte18g00671 674 ProSiteProfiles Response regulatory domain profile. 58 176 IPR001789 GO:0000160
Pte18g00671 674 Gene3D - 57 237 - -
Pte18g00671 674 MobiDBLite consensus disorder prediction 199 213 - -
Pte18g00671 674 SMART REC_2 57 172 IPR001789 GO:0000160
Pte18g00671 674 Pfam Response regulator receiver domain 59 170 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00671 Pte-Chr18 17702480 17708203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00671 34 664 Response Regulator Gene Family AT5G24470 40.305 1.49e-121 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pte18g00671 Response_reg 5.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00671 K12130 - qsa:O6P43_020012 659.833