Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00654 ATGGGACATTGCTGCAGCAAAAGCGTTTCCGTTGCCAACAATGAAGCCGTGACCGTCGATCACTCCGTCAAATCGCCAGTTCAGCCTGCTTTGACTTCGAATGCGACTAGGAACGCGACGCAATCCGGCGATGCCACTCCAGGCAGGTACACCCCTGCACACTCGTTCACTACCAGTCCTTTCGCGAGTCCTCTTCCGGCAGGGGTGGTGCCATCGCCGGCGAAGACTCCAGGGAGGAAGTTCCGATGGCCTTTACCACCTCCTTCACCCGCGAAGCCGATCATGGCTGCTATTCTGAGGCGGCAAGGGAAGGCCAAACCGAAGGATGGACCTATACCGGAGGAGCAGGGAGGAGAGAGTGGAGAAGCAGAGAGGTCTCTAGATAAGAGCTTTGGCTATACAAAGAATTTCGGGGCCAAGTATGAGCTTGGGAAGGAGGTGGGTCGAGGGCATTTCGGTCATACTTGTTGGGCCACGGCAAAGAAGGGAGAGCTTAAAGGACAGACAGTGGCCGTGAAGATCATATCCAAATCTAAGATGACAACAGCAATAGCCATTGAAGATGTCCGCAGGGAAGTGAAAATATTGAAAGCTTTATCTGGACATCCAAATTTAGTCAAGTTTCATGATGCCTTTGAGGATTCCAATAACATCTACATAGTGATGGAATTATGTGAGGGTGGAGAGCTATTGGACAGAATTCTGTCAAGAGGTGGAAGATACACTGAAGAAGATGCAAAAGGTATTGTTGTACAAGTTCTGAACGTGGTTGCCTTTTGTCATCTTCAAGGCGTCGTGCATCGTGATCTTAAACCTGAGAATTTTCTTTTTCTCTCAAAAGATGAGGATTCTCCAATGAAGGTCATTGATTTTGGTCTATCAGATTTTGTTGGGCCAGATCAACGCTTGAATGATATTGTGGGCAGTGCATATTACGTTGCACCTGAAGTATTACATAGATCTTATAGTGTTGAAGCAGATCTATGGAGTATTGGAGTCATTACGTACATACTATTGTGTGGAAGCAGACCCTTTTGGGCACGTACTGAATCTGGAATATTCCGTTCAGTTTTAAGAGCTAATCCTAATTTTGATGATGTACCCTGGCCAGCTGTATCACAAGAGGCTAAAGACTTTGTCAAGCGGCTTTTGAACAAAGACCATAGAAAAAGAATGACAGCTGCACAAGCACTAACCCACCCATGGTTAAGAGACCAAAAGCAGGATGTGCCTTTAGATATTTTGATATACAAATCGGTCAAATCATATGTTCGTGCTACACCTTTGAGACGTGCAGCGCTAAAGGCTCTTTCAAAAGCTCTGACAGAAGATCAAGTTATTTACCTTAGAGCTCAATTTAGACATTTGGAACCGCGAGAAGGTTTAATATCCCTCGATAATTTTAAAGCAGCTCTCACAAGAAATGCAACTGAAGCTATGAGGGAGTCAAGGGTTCATGACATTTTAAATTTGATGGAACCACTCTCTTACAAGAAGATGGACTTTGCGGAGTTCTGTGCAGCTGCAATCATTCCTCATCAGCTCGAAGCTCTTGAAGATTGGGAGCAAATTGCAATTACAGCTTTTGAGCATTTTGAACAGTCAGGAAATCGGGTTATTTCAGTTGAAGAGTTGGCACAGGATATGAACCTGGGCCCCACTGCCTACCATTTGTTAAGTGATTGGATAAGAAAATCTGATGGAAAGCTGAGCTTCGTTGGATACACTAAGTTCTTGCATGGTCTGACACTTCGCAGTGCAAATACAAGGCACAGACAGCCAGCATGA 1788 0.4519 MGHCCSKSVSVANNEAVTVDHSVKSPVQPALTSNATRNATQSGDATPGRYTPAHSFTTSPFASPLPAGVVPSPAKTPGRKFRWPLPPPSPAKPIMAAILRRQGKAKPKDGPIPEEQGGESGEAERSLDKSFGYTKNFGAKYELGKEVGRGHFGHTCWATAKKGELKGQTVAVKIISKSKMTTAIAIEDVRREVKILKALSGHPNLVKFHDAFEDSNNIYIVMELCEGGELLDRILSRGGRYTEEDAKGIVVQVLNVVAFCHLQGVVHRDLKPENFLFLSKDEDSPMKVIDFGLSDFVGPDQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARTESGIFRSVLRANPNFDDVPWPAVSQEAKDFVKRLLNKDHRKRMTAAQALTHPWLRDQKQDVPLDILIYKSVKSYVRATPLRRAALKALSKALTEDQVIYLRAQFRHLEPREGLISLDNFKAALTRNATEAMRESRVHDILNLMEPLSYKKMDFAEFCAAAIIPHQLEALEDWEQIAITAFEHFEQSGNRVISVEELAQDMNLGPTAYHLLSDWIRKSDGKLSFVGYTKFLHGLTLRSANTRHRQPA* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00654 595 Gene3D - 418 575 - -
Pte18g00654 595 MobiDBLite consensus disorder prediction 20 62 - -
Pte18g00654 595 MobiDBLite consensus disorder prediction 20 90 - -
Pte18g00654 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Pte18g00654 595 Pfam Protein kinase domain 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00654 595 SUPERFAMILY Protein kinase-like (PK-like) 140 427 IPR011009 -
Pte18g00654 595 PANTHER SERINE/THREONINE-PROTEIN KINASE 125 567 - -
Pte18g00654 595 CDD STKc_CAMK 140 402 - -
Pte18g00654 595 Gene3D - 442 510 - -
Pte18g00654 595 FunFam Calcium-dependent protein kinase SK5 313 408 - -
Pte18g00654 595 SMART serkin_6 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00654 595 SUPERFAMILY EF-hand 430 581 IPR011992 -
Pte18g00654 595 ProSiteProfiles Protein kinase domain profile. 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00654 595 FunFam CDPK-related kinase 1 134 229 - -
Pte18g00654 595 Gene3D Phosphorylase Kinase; domain 1 134 229 - -
Pte18g00654 595 ProSitePatterns Protein kinases ATP-binding region signature. 147 173 IPR017441 GO:0005524
Pte18g00654 595 Gene3D Transferase(Phosphotransferase) domain 1 230 417 - -
Pte18g00654 595 FunFam CDPK-related kinase 1 439 510 - -
Pte18g00654 595 MobiDBLite consensus disorder prediction 102 127 - -
Pte18g00654 595 FunFam CDPK-related kinase 3 133 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00654 Pte-Chr18 17460169 17466134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00654 51 586 EF-hand Containing Proteins AT3G50530 60.245 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte18g00654 Pkinase 2.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00654 K13412 - qsa:O6P43_014945 1004.97