Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00652 ATGAAGCTTACATATCCAGTGATGGAGATTAGTGAACAGATTTGTTCGTTGTCATCTAGAGGAGAAAAGTCCGACAGCTTCACCAGTGTACAGCCACATGAAACTGTGATCAAGAAGAAGAAGAGTACTAAGTTGGAAAAGAAAAGAAGGTTTACTGATGATCAAATAAGAGCCTTGGAGTTCATATTTGAATCAGAGGAAAAGTTAGAACCTAGGAAGAAAGTGCAGATAGCAAGAGAACTTGGGCTGCAACCTAGACAGATTGCTATCTGGTTTCAGAACAGGAGAGCCAGATGGAAAGCCAAACGAACCGAACAAGACTACAGAAAACTCAAGCTTGACTATGATAATTTGTTGTCTAGTTTTGAGTCCCTGAAGAAAGAGAAAAACTTACTGCAAGAAGAGTTGTTGAAGCTACGTGATGTGATGGGAGGATCTGAACCTCATGAGGCTAGAAGAGACAACGAGGTAATCAAAGGAAGTAGCAACCATGGAGATGGTAGGAATGTAATCAGGTGGGAGCTGGCTGACAGAAAGGTATCCTGCTCAAGTGATCATGAACATCGATCAGAGGATAAGGAAGCAATGGATTCACGTAATGACAAGAATATTGGGTATAGAAGCTTGGAAGAGAAGAATGGTCCCTTGACATTCACCGAAAAATGGTACAGTACTGTAGATCCATGTGGCATGTTTGATCAGTCTGGTACCAGTTCCCACTGGTCGGACTTCTGGACTTTAAATTAA 747 0.4163 MKLTYPVMEISEQICSLSSRGEKSDSFTSVQPHETVIKKKKSTKLEKKRRFTDDQIRALEFIFESEEKLEPRKKVQIARELGLQPRQIAIWFQNRRARWKAKRTEQDYRKLKLDYDNLLSSFESLKKEKNLLQEELLKLRDVMGGSEPHEARRDNEVIKGSSNHGDGRNVIRWELADRKVSCSSDHEHRSEDKEAMDSRNDKNIGYRSLEEKNGPLTFTEKWYSTVDPCGMFDQSGTSSHWSDFWTLN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00652 248 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 38 196 IPR045224 GO:0003700
Pte18g00652 248 Coils Coil 94 142 - -
Pte18g00652 248 ProSitePatterns 'Homeobox' domain signature. 77 100 IPR017970 GO:0000981|GO:0006355
Pte18g00652 248 Pfam Homeobox associated leucine zipper 102 142 IPR003106 GO:0006355|GO:0043565
Pte18g00652 248 SUPERFAMILY Homeodomain-like 34 102 IPR009057 -
Pte18g00652 248 PRINTS Lambda-repressor HTH signature 73 82 IPR000047 GO:0003677
Pte18g00652 248 PRINTS Lambda-repressor HTH signature 82 98 IPR000047 GO:0003677
Pte18g00652 248 FunFam Homeobox-leucine zipper protein ATHB-7 27 102 - -
Pte18g00652 248 ProSiteProfiles 'Homeobox' domain profile. 42 102 IPR001356 GO:0003677
Pte18g00652 248 CDD homeodomain 49 100 IPR001356 GO:0003677
Pte18g00652 248 SMART HOX_1 45 106 IPR001356 GO:0003677
Pte18g00652 248 MobiDBLite consensus disorder prediction 184 208 - -
Pte18g00652 248 Gene3D - 2 103 - -
Pte18g00652 248 Pfam Homeodomain 47 100 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00652 Pte-Chr18 17442717 17444522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00652 17 246 Homeobox Transcription Factor Family AT2G46680 40.927 8.50e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte18g00652 Homeodomain 7.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00652 K09338 - gmx:100793260 200.29