Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00643 ATGACAGAGACTTTTGGTCCAGATAATAGGAAGAAAAGGAAGCGCCCTAATGGCTTGGTCATATCCAAGAAGAAAAGGAAGTTACTGCCTTTCAACCCAAGTGAGGATCCTGAAAGAAGATTAGAGCAGATGGCATCATTGGCAACAGCATTGACAACCACTGGAACAACATTTAGCAATGAGCTAACATATAAGCCTGGCATGGCACCGAAGTCAGCAAATTGTGCAGCACTTGAGCAAGGAGGAATGCAGGTTTTGTCAAAAGAAGACACTGAAACCTTGAATATGTGCAAGGGGATGATGGAAAGAGGTCAATGGCCACCTCTTATGGTCGTTTTTGATCTAAAAGAAGGATTCACCGTTGAAGCAGACAGATTTATCAAAGATTTGACCATTATTACTGAATATGTTGGAGATGTTGACTACTTGAAGAATCGTGAAAATGATGATGGGGATAGTATGATGACATTACTTTCAGCTTCTGATCCTTCAAAAACACTTGTTATTTGTCCTGACAGGCGTAGCAACATTGCTCGCTTCATCAATGGCATCAACAATCACACACGGGATGGAAAAAGAAAGCAGAATCTCAAATGTGTGAGGTACAATGTAAACGGTGAATGTCGAGTTTTGCTGATAGCAAACAGAGATATACGCAAGGGAGAGAGGCTGTACTATGACTATAATGGGTCTGAGCATGAATATCCAACCGAGCACTTTGTCTGA 726 0.4146 MTETFGPDNRKKRKRPNGLVISKKKRKLLPFNPSEDPERRLEQMASLATALTTTGTTFSNELTYKPGMAPKSANCAALEQGGMQVLSKEDTETLNMCKGMMERGQWPPLMVVFDLKEGFTVEADRFIKDLTIITEYVGDVDYLKNRENDDGDSMMTLLSASDPSKTLVICPDRRSNIARFINGINNHTRDGKRKQNLKCVRYNVNGECRVLLIANRDIRKGERLYYDYNGSEHEYPTEHFV* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00643 241 MobiDBLite consensus disorder prediction 1 15 - -
Pte18g00643 241 MobiDBLite consensus disorder prediction 1 36 - -
Pte18g00643 241 FunFam Histone-lysine N-methyltransferase ATXR5 11 241 - -
Pte18g00643 241 ProSiteProfiles SET domain profile. 107 229 IPR001214 GO:0005515
Pte18g00643 241 CDD SET_ATXR5_6-like 104 241 - -
Pte18g00643 241 Gene3D SET domain 13 241 IPR046341 -
Pte18g00643 241 PANTHER N-LYSINE METHYLTRANSFERASE KMT5A 9 239 - -
Pte18g00643 241 SUPERFAMILY SET domain 100 231 IPR046341 -
Pte18g00643 241 Pfam SET domain 154 229 IPR001214 GO:0005515
Pte18g00643 241 SMART set_7 107 235 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00643 Pte-Chr18 17266845 17268503 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte18g00643 SET 3.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00643 K24406 - cave:132167302 415.616