Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00635 ATGGGAAAGAAAGGAAACAGCTGGTTCTCGTCGGTGAAGAAAGTTTTCAAATCATCTTCTAAGGAGAATAATAATGCAGAGAAGTGGCATCATGAAGCACCAGAAGTGGTTTCATTTGAACATTTTCCAACAGCAAGTTCCCCAGACATCACTAATGATGAAAGTACTACTGCATCCACACCGATGACTGAGGACAGGAATCATGCTATTGCTGTTGCAGCAGCGACTGCTGCTGCTGCCGAAGCTGCTGTTGCGGCAGCTCAGGCAGCGGCTAAAGTAGTGAGAATGGCTGGTTATGGACGCCAGTCCAACGAGGAAAGAGCAGTCATTCTCATTCAGTCATACTACAGGGGATATCTGGCTCGGCGTGCACTGCGCGCTTTGAAAGGATTAGTGAGGCTGCAAGCACTTGTGAGGGGTTACAATGTACGCAAGCAGGCGCAGATGACAATGCGCTGCATGCAAGCACTGGTCCGAGTGCAAGCACGAGTAAAAGCCCGGAGACTCAAATTAACCCATGATAGGCTTCAAAGGAAAATGGAGGAGGAAGAAGCTAAACATCTGAGCACTTGGCAAAGGCATGAAGCAGATAGCAGGCATGGTAGGCGTCTCAGCAGTGAAAGTTATACGAACAATGATTGTCGCAAGCATGATGGCATATTGAAGAAGGAGAGAGCTCTTGCTTACGCTTTCAACTATCAGCAGCACCCAAAGCATCTACTACAATCAGAGTATGATGGATATGATGTAGCAGTACCTTGCGCAAATGAGCATGGAAAGACTCAATGGGGATGGAATTGGCTCGAGCGTTGGATGTCATCACAACCATACCATGCTGAGGCAGACGATGCCTCTTACGTGCCCTTTGCTACGCAAACCAGCACCACCACTACGACAGAGAACATGTCTGAGAAAACAATGGAGATGGATACTGTGTCACCCATGAGTATAAGCAATATAAACGTGGGCCTAATTCATCAAGACATATTAAATAAAAGCCCAAGATCCACCCAACAAGGTAAACAGTCAAGTCCAAGTCATGTACCAAGCTACATGGCCCAGACGCAGTCAGCAAAGTCCAAGGTTAGGAGTCAAGGGATATTCAAGGTGCAGGGCCCAATTGGGCCTCAGTGGAACCATTCAATAAAGAGAACTGCAAATTCTGGATGCGATTCTTCGAGTTCTAGTGGAGGAATAGCTGCTTTCCAATATCCCAGGAGTCCAAGCCCGAAAATAAATGGAATTCGACCACAATCTCGACGGATTGCAAGCTTTAGCCCAGAGCCCAATGGAGTTGAAAATTGGACCTTGCCACGTGGGGGTGTTTGCTGGACATAG 1338 0.4731 MGKKGNSWFSSVKKVFKSSSKENNNAEKWHHEAPEVVSFEHFPTASSPDITNDESTTASTPMTEDRNHAIAVAAATAAAAEAAVAAAQAAAKVVRMAGYGRQSNEERAVILIQSYYRGYLARRALRALKGLVRLQALVRGYNVRKQAQMTMRCMQALVRVQARVKARRLKLTHDRLQRKMEEEEAKHLSTWQRHEADSRHGRRLSSESYTNNDCRKHDGILKKERALAYAFNYQQHPKHLLQSEYDGYDVAVPCANEHGKTQWGWNWLERWMSSQPYHAEADDASYVPFATQTSTTTTTENMSEKTMEMDTVSPMSISNINVGLIHQDILNKSPRSTQQGKQSSPSHVPSYMAQTQSAKSKVRSQGIFKVQGPIGPQWNHSIKRTANSGCDSSSSSGGIAAFQYPRSPSPKINGIRPQSRRIASFSPEPNGVENWTLPRGGVCWT* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00635 445 MobiDBLite consensus disorder prediction 44 62 - -
Pte18g00635 445 MobiDBLite consensus disorder prediction 187 209 - -
Pte18g00635 445 MobiDBLite consensus disorder prediction 41 62 - -
Pte18g00635 445 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Pte18g00635 445 PANTHER IQ-DOMAIN 5-RELATED 1 393 - -
Pte18g00635 445 MobiDBLite consensus disorder prediction 334 364 - -
Pte18g00635 445 SMART iq_5 104 126 IPR000048 GO:0005515
Pte18g00635 445 SMART iq_5 127 148 IPR000048 GO:0005515
Pte18g00635 445 Gene3D - 104 147 - -
Pte18g00635 445 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Pte18g00635 445 Coils Coil 159 186 - -
Pte18g00635 445 MobiDBLite consensus disorder prediction 334 415 - -
Pte18g00635 445 MobiDBLite consensus disorder prediction 378 402 - -
Pte18g00635 445 Pfam Protein of unknown function (DUF4005) 331 380 IPR025064 -
Pte18g00635 445 Pfam IQ calmodulin-binding motif 106 126 IPR000048 GO:0005515
Pte18g00635 445 Pfam IQ calmodulin-binding motif 132 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00635 Pte-Chr18 17191593 17195279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00635 1 432 IQD Protein Family AT3G49260 48.832 1.54e-106 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00635 - - qsu:112034600 444.121