Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00626 ATGAATTACGGCAGACTAAAATCATCGGACCCTGGTAGCTCCTCCAGGAGGTCCACTCTATCGGAGGCGTCGCTGACAACTGCTATGCATGCAACTAACCACAGGAAGAAGAAGTTCATCTTCCTTGCTCTTCTTGCCGTGGTCTTGATCATTGCTTCTGCTGTCTCTGCTGTCATTCTCGTCAGCCATCGCAATCGGGGTCATGACGGGTCTGGTATCCGCAAACCCACACAAGCCATCTCCCAGACCTGCAGCAAGACCCGATACCCGGCCGTATGTGTGAACTCGCTCCTCGACTTCCCGGGATCCACCCAAGCTTCAGAGCAAGACCTTGTCCCCATTTCGTTTAACATGACATTGCAGCACTTTAACAAAGCTTTCTACTACTACTCCGGCATCTCCAACATCCAGATGGACCCACGTCTACGCTCTGCTTACGAAGACTGCCTTGAGCTATTGGATGGTGCAGTCGACGCAATCACGCGCTCACTGACATCCGTGGAGTCCCAGTCCGGAGCCAGCACAGAGGACGTGCTGACGTGGCTGAGCGCCGCCCTTACAAACCAGGACACATGTGAGGAGGGATTCTCGGACTTGAGTGGGACCTTGAAGGATCAGATGGCGGCTCAGTTGAAGGACTTATCGGAACTCGTGAGTAATTGCTTGGCCATTTATTCGGCGCGTGGGAGTGACGATTTTTCTGGAGTACCAATACAGAATCGGCGTAGACTTATGGGAGAGAATGGCCATGCCGATTTTTCAAAAGGTCAAATGGGCAACTTCCCCAAATGGTTGAGTGGGAGAGACCGGAGGCTTTTGGACTTGCCACTGTCACAAATTCAGGCAGATATGGTGGTGTCGGCGAATGGGAACGGTACGTATAAGACAATCGGAGAAGCCATAAAAAGCGCGCCACAATTCAGTACACGACGAACCATAATATATGTGAGGGCAGGAAGGTACGAAGAGAAAAATCTGAAGGTGGGAAGGAAGCAATGGAATTTGATGTTCATAGGAGACGGAAAGGGTAAAACTGTAATAACAGGTAAAAGCAGTGTTGGCGATGGCGCCACAACATTCCACAGCGCTTCCTTCGCTGCTTCGGGTACTGGCTTTATTGCGAGGGATATCACCTTCGAGAATTACGCGGGCCCAAGCAAACACCAAGCTGTGGCTCTTCGTGTTGGAGCGGACCATGCTGCGGTCTATCGTTGCAGCATTGTGGGTTACCAAGACACGTGTTATGTTCACTCCAATCGTCAATTCTTTCGTGAATGTGACATATATGGCACAGTGGACTTCATCTTTGGCAATGCAGCAGTCGTTTTCCAAAACTGTAACCTAAATGCTCGCAAGCCTATGGCCAACCAGAAGAACACCATTACAGCTCAAAACAGGAAAGACCCCAATCAAAACACTGGTATATCCATACACAACTGTCGGATCCTTCCGACACCTGATCTCCAGGCAGTCAAGGGAACCATCCCAACCTATCTTGGTCGCCCATGGAAGCTTTACTCCAGAACAGTTTACATGTTGTCCTACATGGCTGGTCACATACATCCTCGTGGTTGGCTTGAGTGGAATGGGAACTTTGCCTTAGATACATTGTACTATGGTGAATATATGAACTCCGGGCCTGGTGCAGCAGTTGGGCAACGGGTAAAGTGGCCTGGATATCGGGTGATCACATCCACAGTAGAGGCCAGCAGGTTTACTGTGGCGCAATTCATATCCGGCTCGTCTTGGCTGCCGTCGACCGGGGTGGCATTTATTGGAGGGTTATGA 1788 0.5045 MNYGRLKSSDPGSSSRRSTLSEASLTTAMHATNHRKKKFIFLALLAVVLIIASAVSAVILVSHRNRGHDGSGIRKPTQAISQTCSKTRYPAVCVNSLLDFPGSTQASEQDLVPISFNMTLQHFNKAFYYYSGISNIQMDPRLRSAYEDCLELLDGAVDAITRSLTSVESQSGASTEDVLTWLSAALTNQDTCEEGFSDLSGTLKDQMAAQLKDLSELVSNCLAIYSARGSDDFSGVPIQNRRRLMGENGHADFSKGQMGNFPKWLSGRDRRLLDLPLSQIQADMVVSANGNGTYKTIGEAIKSAPQFSTRRTIIYVRAGRYEEKNLKVGRKQWNLMFIGDGKGKTVITGKSSVGDGATTFHSASFAASGTGFIARDITFENYAGPSKHQAVALRVGADHAAVYRCSIVGYQDTCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCNLNARKPMANQKNTITAQNRKDPNQNTGISIHNCRILPTPDLQAVKGTIPTYLGRPWKLYSRTVYMLSYMAGHIHPRGWLEWNGNFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASRFTVAQFISGSSWLPSTGVAFIGGL* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00626 595 Pfam Pectinesterase 283 580 IPR000070 GO:0030599|GO:0042545
Pte18g00626 595 Pfam Plant invertase/pectin methylesterase inhibitor 79 224 IPR006501 GO:0004857
Pte18g00626 595 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 227 IPR035513 -
Pte18g00626 595 MobiDBLite consensus disorder prediction 1 20 - -
Pte18g00626 595 Gene3D - 277 595 IPR012334 -
Pte18g00626 595 ProSitePatterns Pectinesterase signature 2. 428 437 IPR033131 -
Pte18g00626 595 FunFam Pectinesterase 76 228 - -
Pte18g00626 595 SMART PMEI_2 75 224 IPR006501 GO:0004857
Pte18g00626 595 SUPERFAMILY Pectin lyase-like 279 594 IPR011050 -
Pte18g00626 595 NCBIfam pectinesterase inhibitor domain 55 225 IPR006501 GO:0004857
Pte18g00626 595 PANTHER PECTINESTERASE 50 585 - -
Pte18g00626 595 FunFam Pectinesterase 277 595 - -
Pte18g00626 595 CDD PMEI-like_3 84 224 - -
Pte18g00626 595 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 226 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00626 Pte-Chr18 16871707 16875248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00626 1 595 Carbohydrate Esterase AT5G53370 61.667 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00626 - - qsa:O6P43_015006 850.121