Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00624 ATGTATGCAGAGATTGGTCTTCTGTTTCCATATAATCAGAATTTCTCCCTAGAGCTTCATCAACTTGAGGAGTACTGCAAAACGCAGAAGCCGAATGCTTCACTGCAGCACAACCTAGCTGAAGTCTCAAACATATACGAATATGACCTGGGTGGAGAAGGGGATCTTTTCAAAGCTCCTGAGCCTATTGTTGAACAACCAGTCTTGGGCCTGGACCTCATGGAGGCTGCGATTTCTATGTTTAGTGAAGACGTAATCTCCTCTCGGGGAATAAAAACGGGAGATATGAATTCCCTTCAAAATGAGCAGCTTTTAAATACTGCACTTTATGAGTGCGAGAAGAAACTCCTAGAAGAAGAAGCAGCAGAAGCACCATTCTTCGAGATCCTGGATACCAAGATTCCATCTCTTAAGGGCAATGAGAATGAAATTCAAGATGATAAATCTCTTCCTGATGTACCATTTCAAAAGAGTGTGAGTTTGGGATCCTTGAGCTCAATGGACTGGATGCATGGAACTGCAATCAAACCTGCTTTTCTTGACTTTCCAGCAATGGATTTCAGTGTCTATGGGATGCGTAGAGCATATAGTGAAGGAGACATTATGACTCTTGGCAACCAAAATGGGAGCCTCATCCAATCTTCCCTTGAGAAGCCTATCAGTGTCAGCGTCAGGGAGGAACGTCAGGAGCAGCTCTGGAGGTACAGAAATAAGAAGTCAAAGAGGAACTTCGGCAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAATCAGCCACGAGTTCGTGGAAGGTTTGCGAAAACTGAGGAACCTGATGTTAAGAGGCAATGA 837 0.4421 MYAEIGLLFPYNQNFSLELHQLEEYCKTQKPNASLQHNLAEVSNIYEYDLGGEGDLFKAPEPIVEQPVLGLDLMEAAISMFSEDVISSRGIKTGDMNSLQNEQLLNTALYECEKKLLEEEAAEAPFFEILDTKIPSLKGNENEIQDDKSLPDVPFQKSVSLGSLSSMDWMHGTAIKPAFLDFPAMDFSVYGMRRAYSEGDIMTLGNQNGSLIQSSLEKPISVSVREERQEQLWRYRNKKSKRNFGRKIKYACRKALADNQPRVRGRFAKTEEPDVKRQ* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00624 278 ProSiteProfiles CCT domain profile. 228 270 IPR010402 GO:0005515
Pte18g00624 278 Pfam CCT motif 228 270 IPR010402 GO:0005515
Pte18g00624 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 178 270 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00624 Pte-Chr18 16829260 16834059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00624 184 269 C2C2-CO-like Transcription Factor Family AT3G21880 40.698 5.20e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte18g00624 CCT 3.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00624 - - qsa:O6P43_015011 353.984