Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00608 ATGCACCAGAATAAGAACATGGCAGAAGGTTTCGCATCCTCTAGTCTGAGTTTCAATGGAATGTATGTTTCCAAAGTCGTACTGTTTGCTATGGCTGCCTTTCTCCCAAGCTATGTGATGAGCAGTGCGAGCTACAGTTCAATCTACAGCTTCGGAGATTCTTGGGCTGACACGGGCAGTTCGGATTACTTTCACAAAGTTCAAAACTTCTCTAGTAATTCCTTGAAGTATCCATATGGAGAGACCTACTTTGGACACCCCACTGGAAGATTTTCTAATGGCCGCTTGGTCATCGATTTCATTGCTGAGCATCTGGGGCTGCCATTTGTGAAACCTTATTTTGGGCCCAGCAGGAGAGGATATGTGCAGATGCAGGAGGGTGTCAATTTTGCTATTGGAGGAGCTACAGCGTTGGATCAAGGTTTCTTTCAGGCTAGGAGAATTCCTTCTTCCACCAAATATTCTTTGAGAGCTCAGTTAGATTTGTTCAAAAACTCCCTCCCTTTTCTCTGTGCATCACCTTCAAGCTGCATGCACAAATTCACAAACTCTTTATTCTTGGTTGGTGAGATTGGAGGGGTTGATTACTTATTAGCTGCTGGATCAAGAAAAAGCAAAGCAGAGCTTACATCGTATGTACCTCAAGTTGTTAATGCAACCATTTCAACAGTTAAGGAGTTGATAAATCATGGAGCAGCAACGCTCTTGGTCCCTGGGGTTATTCCAATTGGGTGTAATCCATATTTCTTAACCATTTTTAAGGATTCTGAGCAGCATGAATATGATCGATATGGCTGTCTCAAGTGGTTCAATAAGTTTTCCGAAAATCACAACACACAACTTCTAGTTGAAATAAATAATCTCAAAATGCTTTATCCTCATGCCAACTTCTTTTACGCTGATTATTACAATATTTTGTTGAAGCTTGTTCGTGCTCCACCCAAATATGGTTCTGGAGAAGGATTGGCTGCGTTAAAATGTTGTTGTGGAGGGGGAGGGCCATATAACTTGAATATGACAGCACGGTGGCAATAA 1035 0.4193 MHQNKNMAEGFASSSLSFNGMYVSKVVLFAMAAFLPSYVMSSASYSSIYSFGDSWADTGSSDYFHKVQNFSSNSLKYPYGETYFGHPTGRFSNGRLVIDFIAEHLGLPFVKPYFGPSRRGYVQMQEGVNFAIGGATALDQGFFQARRIPSSTKYSLRAQLDLFKNSLPFLCASPSSCMHKFTNSLFLVGEIGGVDYLLAAGSRKSKAELTSYVPQVVNATISTVKELINHGAATLLVPGVIPIGCNPYFLTIFKDSEQHEYDRYGCLKWFNKFSENHNTQLLVEINNLKMLYPHANFFYADYYNILLKLVRAPPKYGSGEGLAALKCCCGGGGPYNLNMTARWQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00608 344 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 32 338 - -
Pte18g00608 344 Pfam GDSL-like Lipase/Acylhydrolase 48 304 IPR001087 GO:0016788
Pte18g00608 344 Gene3D SGNH hydrolase 36 343 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00608 Pte-Chr18 13948451 13951584 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00608 28 329 Pollen Coat Proteome AT1G75930 30.341 3.67e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00608 - - qsa:O6P43_014536 310.457