Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00605 ATGGAAGGTCCATCTGCACCAGCAATTCGAAGAGACCCTTACGAGGTTTTGGGTGTTTCAAGGGATTCAACGGATCCGGAAATCAAAACAGCTTATAGAAAACTCGCTCTCAAATATCATCCGGATAAAAATGGTAGCAATCCTGAAGCTTCAGAATTATTCAAAGAGGTTGCATATTCTTATAGCATCTTATCTGATACAGAAAAGAGACGGCAGTATGACAGTGCTGGTTTTGAGGCGCTTGACGCCAGTGGCATGAACATGGAAATTGACTTGTCAAATCTTGGCACTGTCAATACAATGTTTGCAGCTCTGTTCAGCAAACTGGGTGTTCCCATCAAGACCACCATCTCAGCAAATGTGCTTGAGGAAGCTCTTAATGGGACTGTTACTGTTAGACCTCTTCCAATTGGAACATCAGTCAGCGGAAAGGTAGATAAGCAATGTGCACATTTCTATGGCGTAACAATAAATGAGCAGCAAGCTGAATCAGGGGTTATAGTAAGAGTAACTTCATCTGCACAAAGCAAATTCAAGTTGCTTTATTTCGAACAAGAAGCAAATGGTGGTTACGGTTTGGCAATACAGGAAGATAGTGAAAAGACTGGTAAAGTTACTTCTGCTGGAATGTATTTTTTACATTTTCAAGTTTACAGAATGGATTCAACTGTCAATGCGTTAGCCATGGCTAAAGATCCTGAAGCTGCATTCTTTAAAAGGTTGGAAGGTCTCCAACCATGTGAAGTCTCAGAACTTAAAGCTGGCACTCATATATTTGCTGTATATGGAGACAACTTCTTCAAGACAGCTTCATACACAATCGAGGCTGTTTGTGCAAAGTCATATGAGGATACAACTGAAAAACTTAAAGATATTGAGGCCCAAATATTGAGAAAGAGAAATGAGCTTCGCCAGTTTGAAACAGAATATAGAAAGGCATTGGCACGGTATCAAGAAGTGACTGAAAGATATGCCAAAGAAAAGCAATCAGTTGATGAACTTCTAAAACAGAGAGATACTATCCACTCATCGTTTACGGTTACAAAAACAATTAGTGTAGGTGCTAGTAACTTAAGCAATGGCAGTACTAGCAAAATTTCTGGCGATGAGAGCCCTATAGATGATGGAAGTTCTGATGCCAAAGACAAATCAGGCAAAAAGAAATGGTTTAACCTCAGTCTTAGGGGCTCTGATAAGAAGTTAGGCTGA 1209 0.4003 MEGPSAPAIRRDPYEVLGVSRDSTDPEIKTAYRKLALKYHPDKNGSNPEASELFKEVAYSYSILSDTEKRRQYDSAGFEALDASGMNMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVDKQCAHFYGVTINEQQAESGVIVRVTSSAQSKFKLLYFEQEANGGYGLAIQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEAAFFKRLEGLQPCEVSELKAGTHIFAVYGDNFFKTASYTIEAVCAKSYEDTTEKLKDIEAQILRKRNELRQFETEYRKALARYQEVTERYAKEKQSVDELLKQRDTIHSSFTVTKTISVGASNLSNGSTSKISGDESPIDDGSSDAKDKSGKKKWFNLSLRGSDKKLG* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00605 402 FunFam Chaperone protein dnaJ 16 1 94 - -
Pte18g00605 402 CDD DnaJ 12 66 IPR001623 -
Pte18g00605 402 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Pte18g00605 402 SMART dnaj_3 11 69 IPR001623 -
Pte18g00605 402 PRINTS DnaJ domain signature 69 88 IPR001623 -
Pte18g00605 402 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pte18g00605 402 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pte18g00605 402 PRINTS DnaJ domain signature 49 69 IPR001623 -
Pte18g00605 402 Gene3D DnaJ domain 5 94 IPR036869 -
Pte18g00605 402 ProSiteProfiles dnaJ domain profile. 12 77 IPR001623 -
Pte18g00605 402 MobiDBLite consensus disorder prediction 359 385 - -
Pte18g00605 402 Pfam DnaJ domain 12 74 IPR001623 -
Pte18g00605 402 Coils Coil 282 337 - -
Pte18g00605 402 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 8 400 - -
Pte18g00605 402 SUPERFAMILY Chaperone J-domain 11 93 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00605 Pte-Chr18 13914713 13920417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00605 5 75 C2H2 Transcription Factor Family AT1G74250 43.421 9.51e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00605 - - gmx:100811270 708.368