Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00582 ATGTTAACGTTTTCCACAGCTACACGTCCTCAAACTACTCCCTTTTGCTTCAATTATAATTCTGTGTCTGAGCGGTTGAAAGGTTTCCAGCATGGATGGACACCCACGGACTGCATTGCCTGCGAAACTAGAACCAGAATTCGACCCATCAAAGCGGCTACATCGCCATATCCGTTGCTTCAACCTCCCAAACTTGAAGACTCAAACTCCGAGCTAGAGCCTGCGGACCCCGATTTCTACAAGATAGGATATGTTCGAAGCATGCGGGCTTACGGAATTGAATTCAAGGAAAGCCCTCAGGGGTTTGGAGTCTATGCTTCCAAAGACATAGAACCACTTCGACGGCCAAGGGTAATAATGGAAATTCCAATAGAATTGATGTTGACGATACGCCAAAAACAACCGTGGATGTTTTTTCCTGATATAATTCCAATCGGTCATCCTATATTTGACATTATTAATTCAACAAATCCTGAGACAGATTGGGACTTACGGTTGGCATCCCTACTTATTTATGCGTTTGATGTAGAAAACAACTTTTGGCAATTATATGGTGACTTTTTACCCAGTGTTGATGAGTGCACTAGCTTACTTCTAGCTAAAGAGGAGGAGCTTTTGGAATTACAGAATGCCAAGCTTTCTTCGACAATTAGAGACGACCAACGCAGGGCACTAGAGTTCTGGCTAAAGAACTGGCACGATGATGTACCCTTTAAAATAAAGCGTCTCGCTCGCCAACCTGAAAGGTTTATTTGGGCAGTGGCCACTGCACAAACGAGATGCATTAATATGCAAATGAGGGTTGGTGCCCTAATTCAAGATGCCAACATGCTTGTTCCTTATGCTGACATGCTGAATCATTCCTTTCAGCCAAACTGCTTTCTACATTGGCGTTTTAAGGACCGTATGCTTGAGGTGCTGATAAATGCTGGCCAGCGGATTAGAAAGGGGGAAGAAATGACAATCAGTTACATGAGCCAACAGAAGAATGATATGTTAACGAAACGATATGGCTTTTCATCTGCTGCGAATCCATGGGATGTTATTGAATTTTCGGGCGATGCAAGGATTCACTTGGAATCATTCTTGTCTGTCTTTAATATATCTGGCCTGCCAGAGGAGTATTACCATAATAGTCTACTATCTAATGATGGGGATACTTTTATTGATGGAGCAGTTATCGGTGCAGCACGAACATTACCTACTTGGTCTGATGGAGATGTCCCTCCGATTCCCAGCATGGAAAAGAAAGCTGTGAAAAGTATACAGGAAGAATGCAAGCAAATGCTTGCGGAATTTCCTACTACCATTAAGGAAGACCAAAAATTGCTGGTTTCAGAGTTCTATGCAATAAAACCACTATTTTATGATCACAGAATCGATGCCAGAAGCTTCAAGGAGACTCGAAACTGCCATAAAGTACAGATTGCACAGGAAATTGTTCATAGAAAAAGTGATCCGGACATTAGAGATATATCTAGACCGCATTCTCTTCTGACATGGATGTCATGGAATTTTGGCTACAAGAATAATTCATTTTAA 1542 0.4202 MLTFSTATRPQTTPFCFNYNSVSERLKGFQHGWTPTDCIACETRTRIRPIKAATSPYPLLQPPKLEDSNSELEPADPDFYKIGYVRSMRAYGIEFKESPQGFGVYASKDIEPLRRPRVIMEIPIELMLTIRQKQPWMFFPDIIPIGHPIFDIINSTNPETDWDLRLASLLIYAFDVENNFWQLYGDFLPSVDECTSLLLAKEEELLELQNAKLSSTIRDDQRRALEFWLKNWHDDVPFKIKRLARQPERFIWAVATAQTRCINMQMRVGALIQDANMLVPYADMLNHSFQPNCFLHWRFKDRMLEVLINAGQRIRKGEEMTISYMSQQKNDMLTKRYGFSSAANPWDVIEFSGDARIHLESFLSVFNISGLPEEYYHNSLLSNDGDTFIDGAVIGAARTLPTWSDGDVPPIPSMEKKAVKSIQEECKQMLAEFPTTIKEDQKLLVSEFYAIKPLFYDHRIDARSFKETRNCHKVQIAQEIVHRKSDPDIRDISRPHSLLTWMSWNFGYKNNSF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00582 513 CDD SET_LSMT 92 339 - -
Pte18g00582 513 ProSiteProfiles SET domain profile. 91 325 IPR001214 GO:0005515
Pte18g00582 513 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 70 445 - -
Pte18g00582 513 SMART set_7 91 331 IPR001214 GO:0005515
Pte18g00582 513 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 85 339 - -
Pte18g00582 513 Pfam SET domain 101 324 IPR001214 GO:0005515
Pte18g00582 513 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 336 461 IPR036464 -
Pte18g00582 513 SUPERFAMILY SET domain 99 339 IPR046341 -
Pte18g00582 513 Gene3D set domain protein methyltransferase, domain 1 85 339 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte18g00582 SET 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00582 - - cill:122277285 680.633