Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00546 ATGGAGAAAAATATCAGGAGAGGTGTGATGGATCAGCATAGAAACTATGAACATGGGCAATACAATAACGTTGAAAATAGAATTGAGGGGCCTCGGTCTGAAGGCCGAAAGCTTTTAAATGATCCATCAATGAATGTAAATGCTAACATGCGACCTCCAGACTCCAATATGTCTTTTAGCAACAGGCCTGTGAATTTCTCGATTCAGACTGGTGAAGAATTTTCTCTCGAGTTTATGCAAGAGAGAGTGAATCCTAGACCACAATTTGTGCCAAATGCATATGCTGACTCTAGTAGTGCATCAGGCTACATGGATCTGAAAGGCTTATTGGGTGTTTCTCATGCTGGTTCTGATAGTGGTTCGAGTGTTTGTATGTTTAATTCTCTAGAAAGAGGCAATGCCCAAGATCTTGGAAGGAAAGGATTGTCTTCTCATGATAAAATTTACCATGATTCAGTGAGATCAGTTCCTAGAGCTTCATCACAAAATGATATAAATCGGAAAATTCACAGTTTTACCGCATCTGGATCTTCGGATAGGCCATCTAATAAGGTGAAGTTCCTATGTAGCTATGGTGGAAAAGTTTTACCACGTCCCAATGATGGAAAGCTTAGATATGTTGGAGGTGTGACACATATTATCACTGTAAGCAAGGATATTTCCTGCTCTGCTTTAATGCAGAAAGCCATGTCACTTTACAGCCAGACTCATGCAATAAAATATCAGCTTCCTGGTGAGGATCTTGATGCATTAGTTTCTGTATCTTGCAATGAGGACCTGCAGAACATGATGGAGGAATTTGGTGTTTTAGATGGAGGTTCACAGAAACCTAGACTGTTTTTGTTTTCTGAAAAGGATTTAGAGGATGTTCAGCTTGGACTGGATACACCGGAAGATTATTCAGAGATGCAATATGTAGTTGCTGTAAATTACATGGACCTTGGTTCACGGTACAACTCAGTTGCATTGGCTAGCCCTCCAGGTAGTAATTTGGATGAGTTACTGAACTTGACTGTTGAACCTGGTAGTCTAAGGGTGGAGCAAGATTCTTTTAAAGTCACCAATCTACCGCCAAGAGTGCTTCCATCTTCTGCAGTGATGGTGCCAAATGTATCTCACACATCTGATGCGAATCTTCAATTTTACACAGGAGAGAAGATATATCATGGAGAAGCTAGCCAGCATCTTCCATTTACTTTATACCCCAGGGAAAGCACTGCTGATAAAACTAATGTACCCTCTTCTGCTCCATTGACATATGGCCTGAACTATACAACTTCTGAAAAAGTAACTGCATTTCACGCAGATGGACATCTAGATCATCAGGCAGATTTAGCTGAAGTTATCAAGAGTGGGTCCCTTACAGGAGATTTAAATTTGTCTGGAATGGAGGTAAAACTGAATAGGAACAGCTCAGGTCAGAAAATAAATGAGGAACATTTGACAAAGGATTCAAAGATGAAAAGGGAGAGGTCACTCCAAAAAGTAGATGAAGCTGCAAAAGGTCAGAATCTTGAAAACGACTATACTGCTTCCTTGCATCAGTATGATAGTTCCATTAGAGAACAACTTCCTAGGCAAGAAGTTACAGTTCCTAGCATAATAGCTGACTCGATCTCTCCTACAAGTGGCTATGAACTTTCAGTACCTGCTGAAGATGTTGGTGGAAATAACAATAATAATGGCGAATCACATATGTCCACTGGAATGATCACTGCAGGATATAGCAGTTCTGATGCTGACCCTAGTCACTTAAACAATTTCAAGGCTTCCACAGATCCTCGCCGGACTTTTCACTCAGAGCAACTTCCTCGTGAGCTTGCAGATCTAAAATGTTTGTCAAAATCTGATGATTCTTTTGGTTCGCAGTTTCTGATAAAGCAAACTCTCTCAGATAACTCTAAGTCAAATACAGAACCATTGGAGAGATTACTCAATGGAAATGTAATCTTGCAGGCTGAGCAGTTTGATCCACCATCTAAACCATTTAACAATAATTCACAGAACATTGATGGTGGATCAATGCAACTTCATGATTCTTTACCATTACCTGAGGATTGCAGTGAGTCAAGCAAGGAAGGGATTGTGCCAATTGTGCAAAAAATGGAGCCAATAAACCCTGTTGCTTGTCCTATGGATGATTGTGAAAGGATCCACAATGAAGAGAATAGCTATAGAGATTCCCGACTAACTAATAAAGATATATCAGGTGAAGGAACTTCCAGAGCCTCTGGCTTCATACAACAGAAATTTGACTTGAATGATCCAGTTACCCATAACATCAATACCAGCAAAGGCCACACCCATCCCTTGGCCTATGCAGAGAGCCCTGCTAAAGCAACTGCTGAAGGGCATGCTATCATTGGTGGCAATAATCAAGATCAAAGAGACATTGTTATTGATATAAATGATCGCTTCCCTCATGACTTCCTTGCTGATATATTTTCACAAGCTCAAGACACTCAGAACCCTGTTACTTTTAGACCGCTTCATGGTGATGGAACTGGCTTAAGCTTGAACTTGGAGAACCATGAGCCTAAACATTGGTCATACTTCCGAAATCTTGCACAGGATGAGTTTGTTAGAAGCAATGTTTCCCTCATGGACCAGGACCATCTGGGTTTCTCAGCTCCAGTAGCAAATGTTAGGGAACAGGCTCCTTTAGATTATGGCTTCCCTCCTGTAAAATCTGAAGGAGTAAATATGCATCATATGAATTCGCACCTCAATTTTAATGAGAAGTATCAGGAAGCACTGTCAGATGTGATTGAATCCCACGCAATGAGTTCAGCTGCAACTTATAATCCAACCCAGATCAAGGGAAATGAAAGTGCTCAACTGGATGAATTAGCTGCTAGAATGCAGTCAGACTATGAAGTTGGGCAGTTGGATGTTTCTAGTGCTGCTCCACCTGTAGTCGATCTTCCATTTGCAGATTTTGATCTTAGTTCATTACAGATAATAAAAGATGAAGATCTCGAAGAGTTGAGGGAGCTGGGTTCCGGCACATTTGGAACTGTTTATCATGGGAAGTGGAGAGGTTCGGATGTTGCTATTAAGCGAATAAAGAAGAGCTGTTTCACAGGTCGATCATCTGAGCAAGAAAGACTGACAATTGAATTTTGGCGCGAAGCTGAAATTCTTTCGAAGCTGCACCATCCAAATGTTGTGGCATTTTATGGCGTTGTGCAGGATGGACCTGGAGGGACGCTGGCTACAGTAACTGAGTTTATGGTTAATGGATCTCTAAGACATGTTTTGGTTTGCAAAGACAGGCACCTTGATCGACGGAAACGCCTAATAATTGCAATGGATGCTGCTTTCGGAATGGAATATTTGCATTCAAAGAATATCGTGCATTTTGACTTGAAATGCGACAATTTGCTTGTCAATTTGAAAGATCCCGTGCGGCCCATCTGCAAGGTAGGAGATTTTGGCTTGTCAAAGATCAAGAGAAATACACTAGTCACGGGAGGTGTTAGGGGAACTCTCCCTTGGATGGCTCCAGAGCTACTGAATGGTAGTAGCAGCAAGGTATCTGAGAAGGTTGATATATTTTCTTTTGGCATTGTTTTGTGGGAAATTCTTACTGGCGAGGAACCTTATGCCAACATGCACTATGGAGCAATCATAGGTGGGATAGTGAATAATACGTTGAGGCCTCCAGTTCCAAGCTACTGTGACCCTGAATGGACACTGTTGATGGAGCAGTGCTGGGCTCCTGATCCTGCCGCACGCCCTTCATTCACTGAAATCGCCAGGCGCTTGCGGGTGATGTCTGCAGCTTGTCAAAGTAAACAAACAGATTCTGCTGGCAAAGTAATGAAATGA 3831 0.4174 MEKNIRRGVMDQHRNYEHGQYNNVENRIEGPRSEGRKLLNDPSMNVNANMRPPDSNMSFSNRPVNFSIQTGEEFSLEFMQERVNPRPQFVPNAYADSSSASGYMDLKGLLGVSHAGSDSGSSVCMFNSLERGNAQDLGRKGLSSHDKIYHDSVRSVPRASSQNDINRKIHSFTASGSSDRPSNKVKFLCSYGGKVLPRPNDGKLRYVGGVTHIITVSKDISCSALMQKAMSLYSQTHAIKYQLPGEDLDALVSVSCNEDLQNMMEEFGVLDGGSQKPRLFLFSEKDLEDVQLGLDTPEDYSEMQYVVAVNYMDLGSRYNSVALASPPGSNLDELLNLTVEPGSLRVEQDSFKVTNLPPRVLPSSAVMVPNVSHTSDANLQFYTGEKIYHGEASQHLPFTLYPRESTADKTNVPSSAPLTYGLNYTTSEKVTAFHADGHLDHQADLAEVIKSGSLTGDLNLSGMEVKLNRNSSGQKINEEHLTKDSKMKRERSLQKVDEAAKGQNLENDYTASLHQYDSSIREQLPRQEVTVPSIIADSISPTSGYELSVPAEDVGGNNNNNGESHMSTGMITAGYSSSDADPSHLNNFKASTDPRRTFHSEQLPRELADLKCLSKSDDSFGSQFLIKQTLSDNSKSNTEPLERLLNGNVILQAEQFDPPSKPFNNNSQNIDGGSMQLHDSLPLPEDCSESSKEGIVPIVQKMEPINPVACPMDDCERIHNEENSYRDSRLTNKDISGEGTSRASGFIQQKFDLNDPVTHNINTSKGHTHPLAYAESPAKATAEGHAIIGGNNQDQRDIVIDINDRFPHDFLADIFSQAQDTQNPVTFRPLHGDGTGLSLNLENHEPKHWSYFRNLAQDEFVRSNVSLMDQDHLGFSAPVANVREQAPLDYGFPPVKSEGVNMHHMNSHLNFNEKYQEALSDVIESHAMSSAATYNPTQIKGNESAQLDELAARMQSDYEVGQLDVSSAAPPVVDLPFADFDLSSLQIIKDEDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFTGRSSEQERLTIEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLVCKDRHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDIFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPSYCDPEWTLLMEQCWAPDPAARPSFTEIARRLRVMSAACQSKQTDSAGKVMK* 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00546 1276 SMART PB1_new 199 284 IPR000270 GO:0005515
Pte18g00546 1276 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1081 1272 - -
Pte18g00546 1276 SMART serkin_6 993 1259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00546 1276 Gene3D - 203 284 - -
Pte18g00546 1276 Gene3D Phosphorylase Kinase; domain 1 986 1080 - -
Pte18g00546 1276 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 204 284 - -
Pte18g00546 1276 SUPERFAMILY CAD & PB1 domains 200 288 - -
Pte18g00546 1276 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 986 1080 - -
Pte18g00546 1276 PRINTS Tyrosine kinase catalytic domain signature 1112 1130 IPR001245 GO:0004672|GO:0006468
Pte18g00546 1276 PRINTS Tyrosine kinase catalytic domain signature 1227 1249 IPR001245 GO:0004672|GO:0006468
Pte18g00546 1276 PRINTS Tyrosine kinase catalytic domain signature 1183 1205 IPR001245 GO:0004672|GO:0006468
Pte18g00546 1276 PRINTS Tyrosine kinase catalytic domain signature 1075 1088 IPR001245 GO:0004672|GO:0006468
Pte18g00546 1276 SUPERFAMILY Protein kinase-like (PK-like) 983 1255 IPR011009 -
Pte18g00546 1276 PANTHER SERINE-THREONINE PROTEIN KINASE 229 1257 - -
Pte18g00546 1276 ProSitePatterns Protein kinases ATP-binding region signature. 999 1024 IPR017441 GO:0005524
Pte18g00546 1276 ProSiteProfiles Protein kinase domain profile. 993 1258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00546 1276 Pfam Protein tyrosine and serine/threonine kinase 994 1256 IPR001245 GO:0004672|GO:0006468
Pte18g00546 1276 CDD PB1_UP2 188 282 - -
Pte18g00546 1276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1118 1130 IPR008271 GO:0004672|GO:0006468
Pte18g00546 1276 CDD STKc_MAP3K-like 999 1256 - -
Pte18g00546 1276 Pfam PB1 domain 200 283 IPR000270 GO:0005515
Pte18g00546 1276 Gene3D Transferase(Phosphotransferase) domain 1 1081 1275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00546 Pte-Chr18 11365163 11373183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00546 38 1185 MAP Kinase Kinase Kinase AT1G79570 40.645 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pte18g00546 PK_Tyr_Ser-Thr 9.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00546 - - qsa:O6P43_034402 1429.46