Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00532 ATGGGGATTTGCTGGGGTTCTACGGCTGAAAACAAAACACCAACCACAACCGGTCAACTTAGTACTAGTACAGCTACAGGAACATTATCACAAATAACCAGCAGCAAGACTTCTTCCTCTGGGAGCAGCAACATCTCCAGGAATAGTCATTTCTCTGCTTCCAGTGGTGATGAAGCTTATCCACATGGATTGATACTGCCTTCAGCCAATCTGAGGATTTTCACCTTTGCAGAACTCAAGGCCGCAACCAGGAATTTTAGACCTGATACTGTACTCGGTGAGGGAGGTTTTGGGAAGGTATTCAAGGGTTGGCTTGACGAGAAGGGTTCATCAAGAAATGGAAGTGGAACAGTCATTGCTGTTAAAAAACTCCACTCAGAGAGCTTGCAGGGATATCAGGAGTGGCAGTCAGAAGTGAATTTCTTGGGCCGTCTTTCTCATCCTAATCTTGTAAAACTGGTGGGATACTGTTGGGAGGAGGAAGAACTGTTGCTTGTCTATGAATTCATGCAAAAAGGCAGCTTGGAAAACCATCTATTTGGAAGGGGCGCTTGTGTCCAACCACTTCTATGGGATATACGCCTCAAGATTGCTATTGGCGCTGCACGTGGCCTGGCGTTCTTGCATTCCTCAGATAAGCAAGTAATCTACAGAGATTTCAAGGCCTCGAACATTTTGCTTGATGGGTCCTATAATGCCAAGTTATCAGATTTTGGCTTAGCAAAACTGGGTCCTTCTGCAAGTCAATCACATGTTACAACAAGGGTAATGGGTACATATGGATATGCAGCTCCTGAGTACGTTGCTACAGGGCATCTGTATGTGAAGAGTGATGTGTATGGCTTTGGTGTGGTTTTGGTTGAGATACTCACAGGCCTTAGGGCACTTGACACAAACCGTCCTAGTGGCCAACATAATTTGGTGGACTGGATAAAACCCTTTCTCCAAGACAGAAGGAAGTTGAAAAGCATCATGGATTCAAGGTTGGAGGGTAAATATCCATCCAAAGCTGCCTTTCATATAGCTCAGCTTGCACTGAAATGCGTTGAAGTCGAGCCTAAACACCGGCCATCCATGAAGGAAGTTGTGGAGAGTCTAGAAAGAATACAGTCTGCCAATGACAATCAAATAGAACGCAAGCAGCGTTCAACTCCTCACACAGCTTACCCTCATCGCCAGCAGCCTTTTCAACATCGCTCACCTCTGCATCCCAAGCAAGATGGTAGAATCCACCAACACCCACCGGGACTCAAATGA 1257 0.4582 MGICWGSTAENKTPTTTGQLSTSTATGTLSQITSSKTSSSGSSNISRNSHFSASSGDEAYPHGLILPSANLRIFTFAELKAATRNFRPDTVLGEGGFGKVFKGWLDEKGSSRNGSGTVIAVKKLHSESLQGYQEWQSEVNFLGRLSHPNLVKLVGYCWEEEELLLVYEFMQKGSLENHLFGRGACVQPLLWDIRLKIAIGAARGLAFLHSSDKQVIYRDFKASNILLDGSYNAKLSDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHNLVDWIKPFLQDRRKLKSIMDSRLEGKYPSKAAFHIAQLALKCVEVEPKHRPSMKEVVESLERIQSANDNQIERKQRSTPHTAYPHRQQPFQHRSPLHPKQDGRIHQHPPGLK* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00532 418 Gene3D Transferase(Phosphotransferase) domain 1 170 392 - -
Pte18g00532 418 FunFam Serine/threonine-protein kinase PBS1 170 384 - -
Pte18g00532 418 MobiDBLite consensus disorder prediction 8 52 - -
Pte18g00532 418 PANTHER OS01G0588500 PROTEIN-RELATED 39 370 - -
Pte18g00532 418 ProSiteProfiles Protein kinase domain profile. 86 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00532 418 Gene3D Phosphorylase Kinase; domain 1 70 169 - -
Pte18g00532 418 SUPERFAMILY Protein kinase-like (PK-like) 63 366 IPR011009 -
Pte18g00532 418 MobiDBLite consensus disorder prediction 372 418 - -
Pte18g00532 418 CDD STKc_IRAK 92 369 - -
Pte18g00532 418 Pfam Protein tyrosine and serine/threonine kinase 90 366 IPR001245 GO:0004672|GO:0006468
Pte18g00532 418 FunFam Serine/threonine-protein kinase BIK1 53 169 - -
Pte18g00532 418 MobiDBLite consensus disorder prediction 1 52 - -
Pte18g00532 418 ProSitePatterns Protein kinases ATP-binding region signature. 92 123 IPR017441 GO:0005524
Pte18g00532 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00532 Pte-Chr18 11160773 11163564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00532 69 394 Receptor kinase-like Gene Family AT4G02010 50.152 6.83e-103 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte18g00532 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00532 - - qsa:O6P43_002192 638.647