Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00526 ATGGGTTGCTGCCAATCGTCGTTCCCAACTGAAACTCACCCGGAAAAGGAGCAAAAACAATCCATCCACCAGACCCTTACCCATGCCCTTGTCAGTAACCAGACCCAGCTACCTTCGGTTGGACCCGACCCGGTTGTTGCAGCTGGAGGGATCCCCTCGTTCTCTGAGTTCTCTTTGTCAGACCTGAAAGCTGCCACCAATAACTTCAGCTCCGACTTCATTGTTTCTGAGAGCGGAGACAAAGCACCCAACCACGTCTACAAAGGCCGCCTCCACAACCGCCGATGGATTGCCGTCAAGAAGTTCACTAAGGCTGCTTGGCCTGATCCAAAGCAATTTGTGGAGGAGGCACTGGGTGTTGGCAAATTGCGGCATCGGAGGCTTGCCAATCTCATCGGCTACTGTTGTGATGGTGATGAGAGATTGCTTGTTGCAGAGTACATGCCTAATGATACTCTAGCCAAACATTTATTCCACTGGGAAAATCAAACAATTGAGTGGGCAATGCGTCTAAGAGTAGGATTCAATATTGCTGAAGCTTTAGACTACTGTAGTTCCGAGGGTCGTCCTTTGTACCATGATTTAAATGCTTACAGGGTTCTCTTTGATGAGGATGGCGACCCTCGTCTCTCATGTTTTGGCTTAATGAAAAATAGCCGCGATGGGAAAAGTTATAGCACAAACCTTGCATACACACCTCCTGAATACTTGAGAAATGGAAGGGTTACTGCTGAGAGTGTTATTTACAGCTTTGGTACTGTTCTTCTGGACCTACTAAGTGGAAAGCACATTCCTCCAAGTCATGCCCTTGACATGATAAGAGGCAAAAATATTATTCTTTTGATGGATTCACACTTGGAAGGAAAATTTTCAACAGAAGAAGCAACTATTGTTGTTAATCTTGCCTCTCAATGTTTGCAATATGAGCCAAGGGAGCGGCCTAATACGAAGGACCTTGTGCATACACTTACCCCTTTGCAAACAAAGTCTGATGTTCCATCCTGCGTGATGCTAGGGATCCCAAAGAATGAGGAAGCCCCATCAACCCCGCAACGCCCTCTTTCACCCATGGGTGAAGCCTGTTCAAGAATGGACCTTACTGCAATACATCAGATCCTTGTCATGACACATTACAGAGATGATGAAGGAACCAATGAGTTATCTTTCCAAGAGTGGACTCAACAAATGAGAGATATGCTGGAGGCAAGAAAGCGAGGTGATTATGCGTTTCGCGATAAAGATTTTAAAACTGCCATTGACTGTTATTCCCAGTTTATTGATGTTGGAACTATGGTGTCTCCCACTGTGTTTGCTCGGCGTAGTCTATGCTATCTGTTCAATGATCAACCAGATCCTGCTCTTAGAGATGCCATGCAAGCACAATTGGTTTCCCCAGATTGGCCCACAGCATTTTACATGCAATCAGTTGCTCTTGCTAAGCTGGACATGCACAAAGACGCTGCAGACATGTTAAACGAAGCAACCACTTTAGAGGAAAAGAGGCAAAAAGGAGGAAGAGGTCCATAA 1527 0.4578 MGCCQSSFPTETHPEKEQKQSIHQTLTHALVSNQTQLPSVGPDPVVAAGGIPSFSEFSLSDLKAATNNFSSDFIVSESGDKAPNHVYKGRLHNRRWIAVKKFTKAAWPDPKQFVEEALGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVGFNIAEALDYCSSEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTAESVIYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEEATIVVNLASQCLQYEPRERPNTKDLVHTLTPLQTKSDVPSCVMLGIPKNEEAPSTPQRPLSPMGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDCYSQFIDVGTMVSPTVFARRSLCYLFNDQPDPALRDAMQAQLVSPDWPTAFYMQSVALAKLDMHKDAADMLNEATTLEEKRQKGGRGP* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00526 508 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 3 503 IPR045845 GO:0004672|GO:0009742
Pte18g00526 508 FunFam probable serine/threonine-protein kinase At5g41260 149 340 - -
Pte18g00526 508 Pfam Protein tyrosine and serine/threonine kinase 85 323 IPR001245 GO:0004672|GO:0006468
Pte18g00526 508 Gene3D Tetratricopeptide repeat domain 397 506 IPR011990 GO:0005515
Pte18g00526 508 SUPERFAMILY TPR-like 400 501 IPR011990 GO:0005515
Pte18g00526 508 Gene3D Phosphorylase Kinase; domain 1 48 147 - -
Pte18g00526 508 SUPERFAMILY Protein kinase-like (PK-like) 54 329 IPR011009 -
Pte18g00526 508 ProSiteProfiles Protein kinase domain profile. 72 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00526 508 Gene3D Transferase(Phosphotransferase) domain 1 149 339 - -
Pte18g00526 508 FunFam probable serine/threonine-protein kinase At4g35230 397 506 - -
Pte18g00526 508 FunFam probable serine/threonine-protein kinase At4g35230 46 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00526 Pte-Chr18 11104641 11110730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00526 57 331 Glycoside Hydrolase AT3G07070 35.314 1.42e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pte18g00526 PK_Tyr_Ser-Thr 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00526 K14500 - cave:132163529 907.516