Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00523 ATGGGGCATGTGATTATCGCTCCGTTGCTTCGGAGTTCACTCATGGATTTCTTGCAGCTGGTGGGGAATCCCTTTACAAAAACGGTGCCGGTTGTGGTTCTTGCTTTCAGGTCTCTTCCATGCTTGTCCACCATAGAAACTCATGCCAATCTACAAGTGAGGTGCAGGAACAAGACCCTTTGTAGCAGAGAGGGAACGAAGGTGGTTTTGACAGATCTCTATAAGGACGAGCAAATAGATCTGGTATTGAGCAAGAAAGCCTTCATGGCCATGGCTAAGAAGGGTTTGGGCCAACAAGTTTCAGATCTTGGAATCGTTGATATAGAATATAAATGGATACCCTGTGTATACAAAAACCGTAATTTGACAGTAAGAGTGGAAGAAACAAGCAAGAATCCAGATTATTTGGCACTTAAGTTTCTCTATCAAGGTGGTCAAACAACGATACTAGCTGTATCAGTATTGCAGGTGGGTATTTTCCAGACAATATCGAGCTCCCTTCAACGGAGTCATGGAGCAGTGTGGGAAACAAGCTTCTCTGCAGCTCCAGCTGGGCCATTGGAGTTCCAGATAGCTGTGGTTGGAGGGTTCGATCACCTGTGGGTTAGGTCAAACATTCCCCTTCCTGCGGATTGGAAACCAGGGATGACATATGACTTGGGAGTTCAAATAGATGCCATAGAGAAAGAAAGTTGTTCTCCGTGCGACGATGGTAGTTGGCCAACTTTCAAAGGTGTCAAGCAAACCTCGATCACCAGGCTTCGATCTCACTAG 774 0.4587 MGHVIIAPLLRSSLMDFLQLVGNPFTKTVPVVVLAFRSLPCLSTIETHANLQVRCRNKTLCSREGTKVVLTDLYKDEQIDLVLSKKAFMAMAKKGLGQQVSDLGIVDIEYKWIPCVYKNRNLTVRVEETSKNPDYLALKFLYQGGQTTILAVSVLQVGIFQTISSSLQRSHGAVWETSFSAAPAGPLEFQIAVVGGFDHLWVRSNIPLPADWKPGMTYDLGVQIDAIEKESCSPCDDGSWPTFKGVKQTSITRLRSH* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00523 257 Gene3D - 44 115 IPR036908 -
Pte18g00523 257 SUPERFAMILY Barwin-like endoglucanases 50 118 IPR036908 -
Pte18g00523 257 Gene3D - 117 224 IPR036749 -
Pte18g00523 257 PRINTS Major pollen allergen Lol pI signature 141 156 IPR005795 GO:0005576|GO:0019953
Pte18g00523 257 PRINTS Major pollen allergen Lol pI signature 173 190 IPR005795 GO:0005576|GO:0019953
Pte18g00523 257 PRINTS Major pollen allergen Lol pI signature 125 140 IPR005795 GO:0005576|GO:0019953
Pte18g00523 257 PRINTS Major pollen allergen Lol pI signature 55 65 IPR005795 GO:0005576|GO:0019953
Pte18g00523 257 PRINTS Major pollen allergen Lol pI signature 92 107 IPR005795 GO:0005576|GO:0019953
Pte18g00523 257 SUPERFAMILY PHL pollen allergen 120 219 IPR036749 -
Pte18g00523 257 PANTHER EXPANSIN-B3 51 223 - -
Pte18g00523 257 Pfam Expansin C-terminal domain 123 205 IPR007117 -
Pte18g00523 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 120 IPR007112 -
Pte18g00523 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 134 220 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00523 Pte-Chr18 11071870 11073018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00523 49 240 Expansin Gene Family AT4G38400 53.093 6.11e-64 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00523 - - cave:132192007 233.417