Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00521 ATGGTAAACCCAAAAAGGCTTATGGAATTTGCAAGGAAATGGCAGAGAATGGCAGCCATGAAGCGCAAGAGGATTTCACACCCAGCAAAGGACATGAATATCAGTTCGTCTTCGAGGGTCAGTAAAGGTCATTTTGTTGTGTACAGCACGGATCACAAGAGATTCTTACTGCCATTGAATTATTTAAGCAACAATGTGTTTAGAGAGCTTTTCAAACTGTCTGAAGAGGAGTTTGGACTACCTGCCAATGGACCGATCAGATTACCATTTGATGCCATTTCATTGGAGTACATTGTTTCAATGGTACGACAAAATCTTCCTGAATCCTTGGAGAGGGCATTGCTCATGTCTGTGGCAACATCAGCATGTCATAGCTCAGCACCGCTTGGTTCAGCACAAAGTCACAATCAAACAGTTATATGTGGATTTTGA 432 0.4213 MVNPKRLMEFARKWQRMAAMKRKRISHPAKDMNISSSSRVSKGHFVVYSTDHKRFLLPLNYLSNNVFRELFKLSEEEFGLPANGPIRLPFDAISLEYIVSMVRQNLPESLERALLMSVATSACHSSAPLGSAQSHNQTVICGF* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00521 143 Pfam Auxin responsive protein 12 102 IPR003676 GO:0009733
Pte18g00521 143 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 131 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00521 Pte-Chr18 11051073 11051742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00521 40 106 Calmodulin-binding Proteins AT5G20810 33.824 2.81e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00521 - - cit:102610425 162.54