Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00511 ATGGTGGCGATGGATGACAACGAGAGCTGTGGCAGTAGAGTACAGGATACGTCGTCAGCGGTCCGAACTCGGCAACAGAGACAGAAGCTTGAGGTTTACAATGAGGTACTTCGTCGGCTTAAGGATTCAGACATTCAAGAAGCTTTGCAGCCTGGTTTCGACGATGAACTTTGGGCTCACTTCAATCGCCTCCCTGCGCGGTATGCGCTTGATGTAAATGTGGAAAGGGCAGAAGACGTTCTTATGCACAAGAGGTTACTGCATTTAGCACATGATCCTAATAATAGACCAGCAATCGAGGTCCGTCTTGTGCAGGTTCCTCACATTTCTTACGGAAATTTAGCTGGTTCTTCAGATACTCCTGGTACAGAAGCAGGGGAAAGCTCTTCAAATCATTTAACCAGACAAAGTATACATCCACCTCCTGCCTTTGGTTCGTCCCCTAACCTTGAAGCACTTGCACTTGGGACATCTTACGATGAAGAAGAGGAGCATTCCATACATGATAGTGCACAATTTTCCCGGCCCCTGCATGAAATAACCTTATCTACGGATGACAAACCCAAGCTTCTAAGTCAGTTAACAGCCTTGCTTGCTGAGCTTGGTCTGAACATTCAAGAAGCACATGCTTTTTCTACCACAGATGGGTATTCCTTGGATGTGTTTGTTGTCGATGGTTGGCCTTATGAGGAAACGGAACAACTGAAAGCAGCACTGGGAAAGGAAGTTTCAAAAATTGAATGGCGGTCGTGGTGTAATCAAGGATCTCCATCTTCTGTTGGCAACGGTGATCAAGCTGCAATAAAAACTGACATTAAATGTTTGACTATACCTCATGATGGGACCGATGTTTGGGAAATAGATCCTATTCATTTGAAATTTGAAAAACAAATTGCATCTGGCTCATATGGTGAACTGTACAAAGGTACCTATCATAGCCAGGAAGTGGCCATCAAAATCCTCAAGCATGAGCGTTTAAATACAGATTTGCAGAGAGAATTCGCCCAAGAAGTCTATATAATGAGAAAAGTTCGTCACAAAAATGTTGTACAATTTATTGGAGCATGTACAAAACCACCAAGCTTGTGCATTGTAACAGAATATATGCCCGGTGGGAGTTTGTATGATTTCCTTCATAAGCAGAAGGGTGCTTTCAAACTGCCTTCCTTACTTAAAGCTGCTACCGATGTTTCAAAGGGAATGAACTACTTGCACCAAAACAATATAATCCATAGAGATTTGAAGGCTGCCAACCTTTTGATGGATGAAAATGAAGTTGTTAAGGTTGCTGATTTTGGAGTTGCTAGAGTTAAAGCTCAATCAGGGGTGATGACAGCTGAAACTGGGACGTACAGGTGGATGGCTCCTGAGGTTATAGAGCACAAGCCCTACGGTCACAAGGCTGATGTATTTAGTTTTGGAATTGTTTTATGGGAGTTGCTCACGGGAAAGCTTCCATACGAATACTTAACCCCATTACAAGCAGCTGTCGGAGTTGTACAAAAGGGTCTACGCCCGACCATCCCAAAACACACCCATCCAAAGCTTGCTGAGCTTCTTGAGAGATGCTGGCAGCAAGATCCCACATTAAGACCTGACTTCTCAGAAATTATAGAGATTTTGCAGCAATTGGCTAAGGAGGTTGGAGATGAAGGTGAAGAACGTCGAAAGGAAAAATCGGGAGGATTCTTGTCTGCCCTCAGAAGAAATCATCACTGA 1719 0.4375 MVAMDDNESCGSRVQDTSSAVRTRQQRQKLEVYNEVLRRLKDSDIQEALQPGFDDELWAHFNRLPARYALDVNVERAEDVLMHKRLLHLAHDPNNRPAIEVRLVQVPHISYGNLAGSSDTPGTEAGESSSNHLTRQSIHPPPAFGSSPNLEALALGTSYDEEEEHSIHDSAQFSRPLHEITLSTDDKPKLLSQLTALLAELGLNIQEAHAFSTTDGYSLDVFVVDGWPYEETEQLKAALGKEVSKIEWRSWCNQGSPSSVGNGDQAAIKTDIKCLTIPHDGTDVWEIDPIHLKFEKQIASGSYGELYKGTYHSQEVAIKILKHERLNTDLQREFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEYMPGGSLYDFLHKQKGAFKLPSLLKAATDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYGHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKHTHPKLAELLERCWQQDPTLRPDFSEIIEILQQLAKEVGDEGEERRKEKSGGFLSALRRNHH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00511 572 CDD STKc_MAP3K-like 298 541 - -
Pte18g00511 572 MobiDBLite consensus disorder prediction 114 150 - -
Pte18g00511 572 FunFam Serine/threonine-protein kinase isoform 1 282 370 - -
Pte18g00511 572 Gene3D Phosphorylase Kinase; domain 1 281 369 - -
Pte18g00511 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Pte18g00511 572 FunFam serine/threonine-protein kinase HT1 371 561 - -
Pte18g00511 572 MobiDBLite consensus disorder prediction 549 565 - -
Pte18g00511 572 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 131 548 - -
Pte18g00511 572 MobiDBLite consensus disorder prediction 114 143 - -
Pte18g00511 572 PRINTS Tyrosine kinase catalytic domain signature 449 459 IPR001245 GO:0004672|GO:0006468
Pte18g00511 572 PRINTS Tyrosine kinase catalytic domain signature 366 379 IPR001245 GO:0004672|GO:0006468
Pte18g00511 572 PRINTS Tyrosine kinase catalytic domain signature 403 421 IPR001245 GO:0004672|GO:0006468
Pte18g00511 572 PRINTS Tyrosine kinase catalytic domain signature 468 490 IPR001245 GO:0004672|GO:0006468
Pte18g00511 572 PRINTS Tyrosine kinase catalytic domain signature 512 534 IPR001245 GO:0004672|GO:0006468
Pte18g00511 572 SUPERFAMILY Protein kinase-like (PK-like) 281 541 IPR011009 -
Pte18g00511 572 Gene3D Transferase(Phosphotransferase) domain 1 370 565 - -
Pte18g00511 572 Pfam ACT domain 180 225 IPR002912 -
Pte18g00511 572 Pfam Protein tyrosine and serine/threonine kinase 292 541 IPR001245 GO:0004672|GO:0006468
Pte18g00511 572 MobiDBLite consensus disorder prediction 1 24 - -
Pte18g00511 572 SMART serkin_6 292 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00511 572 ProSiteProfiles ACT domain profile. 179 251 IPR002912 -
Pte18g00511 572 MobiDBLite consensus disorder prediction 10 24 - -
Pte18g00511 572 ProSiteProfiles Protein kinase domain profile. 292 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00511 572 Gene3D - 176 247 - -
Pte18g00511 572 MobiDBLite consensus disorder prediction 549 572 - -
Pte18g00511 572 SUPERFAMILY ACT-like 176 248 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00511 Pte-Chr18 10911017 10917502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00511 8 573 MAP Kinase Kinase Kinase AT4G35780 65.669 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pte18g00511 PK_Tyr_Ser-Thr 5.1e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00511 - - qsa:O6P43_002157 900.968