Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00500 ATGTCAGTTGATGTGATCCGGAAGGCATTTCTGGCAACAGAGGAGGGATTCTTGTCCCTTGTCACAAAGCAGTGGCCTATAAAACCACAAATTGCTGCAGTCGGTTCGTGCTGTCTTGTTGGGGTTGTCTGTAACGGAATCCTGTATGTTGCAAACCTAGGTGATTCTCGTGCTGTTTTGGGGAGAGTTGTCAAGGCGACTGGGGAAGTTCTTGCCATTCAATTGTCGACGGAACACAACGCTGCAATAGAGTCTGTCAGACAGGAGTTGCATTCTATGCACCCAGATGACTCTCAGATTGTGGTATTAAAGCATAATGTTTGGCGTGTGAAAGGGCTTATACAGATTTCTAGATCCATAGGTGATGTATATTTGAAGAAGGCTGAGTTTAACAGAGAACCTCTTTATGCAAAGTTTCGACTTCGTGAACCTTTTAAGAGGCCCATTCTGAGTGCAGAACCATCAATATCGGAGCACAATTTGCAACCCCATGATCAATTTGTTATTTTCGCATCTGATGGTCTATGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAATTCAGAATCACCCTCGCTGTGGAAGTGCGAAACGGCTGGTGAAAGCTGCCCTCCAAGAAGCAGCAAAGAAGAGAGAAATGAGATACTCAGATTTGAAACAAATTGATCGTGGGGTTAGGAGACATTTCCACGATGACATCACAGTGATTGTTGTGTTTCTGGATTCAAACCTCCTAAGCAGCTCAAGCTCAGTTAAATCTTCTACTGTGTCTCTACGAGGGGGTGGCATCTCCCTGCCTCCAAACATACTGGCTCCTTGTACTACGCCATCTGAAACTAGCGTTGCCTGA 852 0.4507 MSVDVIRKAFLATEEGFLSLVTKQWPIKPQIAAVGSCCLVGVVCNGILYVANLGDSRAVLGRVVKATGEVLAIQLSTEHNAAIESVRQELHSMHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSAEPSISEHNLQPHDQFVIFASDGLWEHLSNQEAVDIIQNHPRCGSAKRLVKAALQEAAKKREMRYSDLKQIDRGVRRHFHDDITVIVVFLDSNLLSSSSSVKSSTVSLRGGGISLPPNILAPCTTPSETSVA* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00500 283 Pfam Protein phosphatase 2C 4 211 IPR001932 -
Pte18g00500 283 SUPERFAMILY PP2C-like 3 242 IPR036457 -
Pte18g00500 283 CDD PP2Cc 4 240 IPR001932 -
Pte18g00500 283 SMART PP2C_4 1 239 IPR001932 -
Pte18g00500 283 ProSiteProfiles PPM-type phosphatase domain profile. 1 241 IPR001932 -
Pte18g00500 283 PANTHER PROTEIN PHOSPHATASE 10 239 IPR015655 GO:0004722|GO:0006470
Pte18g00500 283 Gene3D - 2 251 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00500 Pte-Chr18 10745182 10749080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00500 1 270 PP2C-type Phosphatase Gene Family AT5G66080 78.519 1.42e-165 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00500 - K01102 pop:7453657 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00500 18 10745182 10749080 Pte18g00500 18 10745182 10749080 RCT