Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00494 ATGGAGCTTGCTGAGATAGGAAGGATTATGTCTTCCTCAGATCAGAGGATATCGAGTTTCAGGAGCGCGTCGGATGCAAGGTCCCATGATGATAATAATGACGAGCTTGAGCTTCAGTGGGCTGCCATTGAAAGATTGCCAACGATGAGACGACTTAGAACATCATTATTTGATCACAAGTATGGCAAAGATGACAAAGATCCAGAAGCTGCAGCTGGCAAAACTAAAATGGTGATTGATGTCTCAGAACTTGGTGCTCCACAGCGCCATTTGTTCATTGAAAAGCTGATCAAGCAAATTGAGGAAGACAACCTTCGTTTGCAGCAGAAACTCAGAGAAAGAATAGGCAGAGTTGGGCTAGAATCGCCAAAAGTACAGGTTAGATACCAAAACTTGTGCGTGGAGGCAGAATGCAACGTGGTTCAAGGAAGACCAATTCCTACGCTTTGGAATACTGTCAAAAGCATACTTCCCGGTATTAGAGAAATCACATGCTGGAAGCGAGAACCTTACAAGCTCACAGTTCTCAAAGGCGTCAGTGGCATTATCAAGCCCTCAAGGATCACTCTACTTCTTGGTCCTCCAAGTTGTGGGAAGACCACGTTGTTACAAGCACTTGCAGGAAGACATAATAGCTCTCTCAAGGTCACAGGGGATATCTCTTACAATGGTTATAAGTTAAATGAATTTGTTCCACAGAAGACATCAGCTTACATTAGCCAATATGACTTGCACATTGCCGAAATGACTGTGAGGGAAACACTTGATTTTTCAGCACGCTGTCAGGGTATTGGAGATAGAGCAGGTAAATCTTGTTCTTCTTATCATCATTTCCAAAGCTCTTTTCAGTATCAGTTTGATCTAAAAGTTAGTTTCTGCATAGACACAATGAAAGAACTCCTTAGGAGGGAGAAGCAAGCAGGGATCATCCCTGACCCTGATATAGATACTTACATGAAGGCCATTTCAGTTGAAGGGTTGAAAAGTACACTCCTCACGGACTACATCATAAGGATTCTTGGATTAGACATTTGTGCTGATACAATGGTAGGAGATGCAATGAACAGAGGAATTTCTGGAGGTCAGAAAAGGAGGTTGACAACAGGTGAGATGATAGTTGGTCCAACAAGAGTTCTCTTCATGGATGAGATATCAACAGGCTTAGACAGCTCCACAACCTTTCAGATTATATCTTGTCTGCAGCAGTTGGCACACATGGCAGATTTTACTATTTTGGTGTCACTTCTTCAACCTGCGCCAGAGACATTTGATCTCTTTGATGATGTTATTTTAATGGCGGAGGGAACAATTGTATACTATGGCCCTCGTAAGGATATTCTTGATTTCTTTGAGAACTGTGGCTTTCGGTGTCCACCACGCAAAGGTGTTGCAGATTTCCTACAAGAAGTTGTGTCTAGAAAAGATCAAGGGAAGTATTGGCGCCATGAAAATCAAGCCCATACTTACGTATCTGTTGGCACTTTGGCAGAAAACTTCAAGGAATTTCATTTGGGAAAGAAGCTAGACCAAGAATTATCATCACCTTTTCCAAAATCTGACTACCAGAAAAGTGGTTTATCACTGAAAGACATGTATTCTATAGGGAAATGGGAACTATTGAAAGCATGCATGGAAAGAGAGTGGCTACTAATGAAGCGCAATGCGTTCGTTCATGTATTCAAATCAGCTCAGCTTGTGGTCATTGCAGTAATAACAATGACAGTTTTCCTAGGAAATAGAAAGAAACTCGACCTCGTGCATGCAAACTATTTCTTGGGTTCTCTGTTTTATGCATTAATCAGACTCATGTGCAATGGGATTGCGGAGCTAGCATTGACAGTGTCTAGACTCACTGTCTTCTACAAGCAAAGGGACTTCTATCTGTATCCCGCATGGGCATTCTCAATTCCAGCCATTATTCTTAAGATTCCATTTTCATTTCTGGATGCGATTCTATGGACAGGCATAACCTATTATGTAATAGGTTACAGCCCTGAACCAGCAAGGTTCTTCTACCAATTCCTTCTCCTATTCCTTCTGCACCAAGTATCAGTTTCTATGTTCCGTCTGACTGCATCAGTAGTCCGCGATCCACCTATTGCATCAACTTGCAGTATTCTGTCCTTGATGATCATATTTCTATTTGGTGGCTTCGTAATACCTAAACCTTTTCTACCTGCTTGGTTGAGGTGGGCATTTTGGCTTTCTCCCATGGCTTATGCAGAGATAAGCGTTTCAGTCAATGAATTCCTTGCTCCAAGGTGGCAAAAGGTTTCCTCTTCAAATGTTACTCTAGGCCACCAAGTTCTAATCAATCGAGGCCTGAACTTTGATCAATACTACTACTGGATATCAATTGCAGCATTACTTGGATTTTGGGTAGTTTTCAACGTTGGATTCACTTGTGCACTGCATTACCTGGACACACCTGGGCGATCTCGAACTAAGGTTTCCTATGACCAGATGACAAATCAAGAACATGAGGAAGATATGAGAAACATAACTGCCAAAGAAACGTCACCATCAGTCAATGTTGTGAAGGATAAAGGAGAATCAAATGGGAGAAACATTCTGCCCTTTGAGCAGATTGCCATATCCTTTGAAGATGTACAGTATTTTGTTGACACCCCCAAGAAATTAAAAGAGCAGGGTTACCCACACAAAAGGCTACAGCTGCTTCAAGACATTACTGGTTCATTTAGGCCAGGGGTTCTTACAGCTCTGATGGGGGTCAGTGGAGCTGGGAAAACAACACTCATGGATGTTCTATCAGGCAGGAAAACTGGAGGGACGATAGAAGGAGATATTAGGATTGGAGGGTATCCCAAAGTCCAAAAAGCATATGCTAGAATATCAGGTTACTGTGAACAAAGTGATATACATTCTCCCCAGATTACAGTTGAGGAGTCTGTCAGATACTCGGCTTGGTTACGCTTGCCTGCACAAGTTGATAAAAATATCAAGCAGGAATTCGCGAATGAAGTCATTCATATGATTGAGCTTGAAAACATCAAAGATTGCTTAGTTGGTATCCCAGGTGTAAATGGCATATCAACCGAGCAGCGCAAACGATTAACTATTGCAGTGGAGTTGGTTGCTAATCCCTCTATACTATTCATGGATGAGCCAACTTCTGGATTAGATGCTAGAGCAGCTGCAATCGTCATGCGAGTTGTGAAGAATATTGTCAGTACAAAGAGGACAGTTGTTTGTACAATTCACCAGCCAAGCATTGACATTTTCGAGTCATTTGATGAGCTGATTTTGATGAAGAGAGGAGGTCAGATAATATACAGTGGGGAGCTGGGTCAAAATTCGAGTAAGCTAATTGAATACTTTGAGTTCATACCTGGGGTACCTAAAATTAAAGAAAACTACAATCCAGCAACATGGATGTTAGAAGTTACTACACCTTCGGCAGAAGCTCGGCTTGGTTTGGACTTTGCACAAGTCTACAAAGAATCTATTCTATACAGGGAAACAAAAAGAATTGTCCAAGAACTGAACTTTCCAAGAGTGGATTCGGAAACAAAATTTTCTACTCTATTTCCAAAAAGTGGATGGGAGCAATTTAAAGCATGCCTCTGGAAACAAAATTTATCATATTGGAGGAGCCCTAAATATAACTTGACGCGATTACTCTTCACCACTGCTTCTTCTTTGTTATTTGGAGTTCTTTTATGGCAGAAAGGACAAAAGATAGAGAGCCAGCAAGATTTTTTCAACATTGTTGGAGCGACATATATTTTCATGCAACTGACAGGAATAAGCAATTGCTCAGCTGTCATGCCTTTTATAGCTAGAGAACGAGCAGTAATGTACAGGGAGAGGTTTGCTGGAATGTACCCCTCCTGGGCATATTCATTATCACAGGTCATCGTTGAGCTTCCTTATATGATATTTCAAGCAGTACTGTTTTCAATAATTACATATCCAGCAGTTAACTTTTATTGGTCCTTCTACAAAATTTGTTGGTACTTCTACAGCGTATTTTCTACATTGATGTACTTCAATTACTTTGGGATGCTTCTGGCATCACTGACTCCATCTTATCAAGTAGCTTCAGTAATGGCATCTTTATGTTACACTCTGTTGAATTTGTTTGCGGGGTTCGTCATTCCTCAGCCAAGAATACCTACATACTGGGTGTGGGCATACTGGATATGTCCATTAGCTTGGGGCATAAATGGTCTCGTTACATCACAATATGGAGATATAAAGCAGGAGATAATGTTCTATGGGAAGAAGACAGCCATCAATGCCTTCTTAAAAGACTATTTTGGGTATAACCATGATAGACTGGGAATTGTAGCGGTTGTACTTTTGGCATTCCCACTTCTTTCTGCAATTGGGTTTGTATTTGCAATAGCAAAACTGAACTTCCAAAGGAGGTGA 4395 0.4121 MELAEIGRIMSSSDQRISSFRSASDARSHDDNNDELELQWAAIERLPTMRRLRTSLFDHKYGKDDKDPEAAAGKTKMVIDVSELGAPQRHLFIEKLIKQIEEDNLRLQQKLRERIGRVGLESPKVQVRYQNLCVEAECNVVQGRPIPTLWNTVKSILPGIREITCWKREPYKLTVLKGVSGIIKPSRITLLLGPPSCGKTTLLQALAGRHNSSLKVTGDISYNGYKLNEFVPQKTSAYISQYDLHIAEMTVRETLDFSARCQGIGDRAGKSCSSYHHFQSSFQYQFDLKVSFCIDTMKELLRREKQAGIIPDPDIDTYMKAISVEGLKSTLLTDYIIRILGLDICADTMVGDAMNRGISGGQKRRLTTGEMIVGPTRVLFMDEISTGLDSSTTFQIISCLQQLAHMADFTILVSLLQPAPETFDLFDDVILMAEGTIVYYGPRKDILDFFENCGFRCPPRKGVADFLQEVVSRKDQGKYWRHENQAHTYVSVGTLAENFKEFHLGKKLDQELSSPFPKSDYQKSGLSLKDMYSIGKWELLKACMEREWLLMKRNAFVHVFKSAQLVVIAVITMTVFLGNRKKLDLVHANYFLGSLFYALIRLMCNGIAELALTVSRLTVFYKQRDFYLYPAWAFSIPAIILKIPFSFLDAILWTGITYYVIGYSPEPARFFYQFLLLFLLHQVSVSMFRLTASVVRDPPIASTCSILSLMIIFLFGGFVIPKPFLPAWLRWAFWLSPMAYAEISVSVNEFLAPRWQKVSSSNVTLGHQVLINRGLNFDQYYYWISIAALLGFWVVFNVGFTCALHYLDTPGRSRTKVSYDQMTNQEHEEDMRNITAKETSPSVNVVKDKGESNGRNILPFEQIAISFEDVQYFVDTPKKLKEQGYPHKRLQLLQDITGSFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGTIEGDIRIGGYPKVQKAYARISGYCEQSDIHSPQITVEESVRYSAWLRLPAQVDKNIKQEFANEVIHMIELENIKDCLVGIPGVNGISTEQRKRLTIAVELVANPSILFMDEPTSGLDARAAAIVMRVVKNIVSTKRTVVCTIHQPSIDIFESFDELILMKRGGQIIYSGELGQNSSKLIEYFEFIPGVPKIKENYNPATWMLEVTTPSAEARLGLDFAQVYKESILYRETKRIVQELNFPRVDSETKFSTLFPKSGWEQFKACLWKQNLSYWRSPKYNLTRLLFTTASSLLFGVLLWQKGQKIESQQDFFNIVGATYIFMQLTGISNCSAVMPFIARERAVMYRERFAGMYPSWAYSLSQVIVELPYMIFQAVLFSIITYPAVNFYWSFYKICWYFYSVFSTLMYFNYFGMLLASLTPSYQVASVMASLCYTLLNLFAGFVIPQPRIPTYWVWAYWICPLAWGINGLVTSQYGDIKQEIMFYGKKTAINAFLKDYFGYNHDRLGIVAVVLLAFPLLSAIGFVFAIAKLNFQRR* 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00494 1464 Gene3D - 165 452 IPR027417 -
Pte18g00494 1464 Coils Coil 93 113 - -
Pte18g00494 1464 Gene3D - 879 1113 IPR027417 -
Pte18g00494 1464 Pfam ABC-2 type transporter 417 470 IPR043926 GO:0140359
Pte18g00494 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 888 1104 IPR027417 -
Pte18g00494 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 865 1118 IPR003439 GO:0005524
Pte18g00494 1464 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 15 268 - -
Pte18g00494 1464 SMART AAA_5 185 436 IPR003593 GO:0016887
Pte18g00494 1464 SMART AAA_5 902 1094 IPR003593 GO:0016887
Pte18g00494 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 459 IPR003439 GO:0005524
Pte18g00494 1464 Pfam ABC transporter 893 1045 IPR003439 GO:0005524
Pte18g00494 1464 Pfam Plant PDR ABC transporter associated 755 815 IPR013581 -
Pte18g00494 1464 FunFam ABC transporter G family member 34 879 1111 - -
Pte18g00494 1464 FunFam ABC transporter G family member 34 162 493 - -
Pte18g00494 1464 CDD ABCG_PDR_domain2 865 1100 IPR034003 -
Pte18g00494 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 465 IPR027417 -
Pte18g00494 1464 Pfam ABC transporter 176 384 IPR003439 GO:0005524
Pte18g00494 1464 Pfam ABC-2 type transporter 1189 1402 IPR013525 GO:0016020|GO:0140359
Pte18g00494 1464 Pfam ABC-2 type transporter 539 750 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00494 Pte-Chr18 10668432 10676930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00494 885 1070 Calmodulin-binding Proteins AT2G36910 27.363 7.92e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00494 K08711 - qsa:O6P43_004529 2133.22