Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00474 ATGACAGTTAAGGAGGACCATAAGATTGTTGAGAGAAAACATGTCTTGGTTTGTATAAATTTGGTCAGAGAAAGCAGAGAGCTGCTAGACTGGGCTCTTGTCAAAGTTGCTGAACCTGGAGATTCTGTTATTGCAGTTAATGTTTGTCGTCGTTCTGATGAGGTTGACAGAGACAAGAAACTGTTGGATGGTTATTTGAAGGTGTACGATGGCCTCAGCCATTTAAAAAATGTTGAACTTACTGGTGAAGTATTGACAGGAAAGTCTATACGCAAAACTCTATTAAGAGAAGTAGAGAATCGTGCTGCTGTGGCAGTAGTGGTAGGAGTAAGCAAACACAGGAGCATAGGGGGTTGGCTTTCAACAGCCAAATATTTTGCAAAAAGATTACCAAGTAGCACTGATATTCAAGCTATCCATAATAGGAAAATAGTCCTTAGAAGGTGCACCAGTGTTCAACCACCAGGTCATAACGTAGACCTTAAATCCAAGCTTTGTCTTATAAGTAATGATAAGGATAACCAAACTGAGCTTGGGGATTCAGAGTTTAAGTCCAGGAAGTCCACATCTATGATGGTTGAGAACACAAAACATATGTCAAAACGAAGTATTGAAAGTGTCCGAGAGGAGTTTAGTACTTGTGCTCAAGAAGGGCTTGGTTGGCCTCTTCTGCATAAACCAACTTCAGCTATAGTTGAAGCCAGACATGCTGCCAGACATTCAAGGAGCATATCTGTGGTGCAATGGGTGATGAGCTTACCAGATAGGTCACCACAGCAAAGTCCTCATTATTATCAAATTAAAGAAACTCCTTTTGAAACGAACCACAGATACAATGAGGATGACAGTAGCAAAATTAGTTCTAACTCTAGTGAGATTTCAAATGGTTTAGAGGACACACTGAAGTTGAAATCATCTGCTTGCAAGTTCTTCAGTTATGAGCTTCTGTGCACTTGTACTTCTCAGTTCTCCTCAGGAACTCTGATTGGGAAGGGAGGATCCAATCGAGTGTACAGAGGAAATCTCCCTGACGGTAAGCAAGTTGCAGTGAAAGTTCTACAGTCATCAAAAGAAGCTAGGAAGGATTTTGCACGTGAAGTTGAAATCATCTCGTCTTTAAAACATAAAAACATTACTTCCTTGTTTGGAATTTCCATTGAAGATAATGCTTTGATATCTGTGTATGAATACTTCCCCAGAGGAAGCTTGGAGGAGAACTTGCACGGCAAGACTAGCCATGAGTCATGTTTATCTTGGGAGGCCAGATTTAATATAGCAATTGGAGTTGCTGAAGCTCTCCATTACTTGCACAAGGAATGCCCAAAATCTGTGATTCATAGAGATGTTAAGTCTTCCAATATTCTTCTTTCGGACAAGTTGGAGCCACAGTTGTCTGATTTTGGTCTTGCAATATGGGGACCAACTACTTCAACGTCTCTGACTCAAGAAGATATTGTTGGAACATTTGGTTACCTTGCTCCTGAGTATTTTATGTATGGCAAGGTCAGTGACAAGATTGACGTCTATGCCTTTGGCGTAGTGCTGCTTGAACTAATATCAGGAAGAAAGCCTATTGGCTCTGAGACACCAAAAGGACAGGAGAGCTTGGTGATGTGGGCTAGGCCAATCATAAAGAATGGTGATGTAAAAGACCTACTGGATCCAAATTTGGATGACAAGTTCAATGCGGTTGAAATGCAGAGAATGGTGCTTGCAGCATCCTTATGCATCACTAGAGCAGCTAGGATTCGTCCCCAAATAGACCAGATATTGGAGATCCTGAAGGGGGACAAAGATGTTAATAAGTTCAGGAATCCCCAAGTGGACAACCATGAGGACTCAGAAGAGCAGGAAAATACAGATGATGATGAAGTTTATCCAAACTCTAGTGCAGATTTGCACCGAAGTCTTGCACTGCTTGATGTTGAGGATGACACTACATCATTTAGCAGTCTTGAGAGGAGCAGTCCATATTTGGAAGAGGACTTGAAAAGCAGATGTAGCAGATCTTCATCAAACTTTGATTAG 2028 0.4127 MTVKEDHKIVERKHVLVCINLVRESRELLDWALVKVAEPGDSVIAVNVCRRSDEVDRDKKLLDGYLKVYDGLSHLKNVELTGEVLTGKSIRKTLLREVENRAAVAVVVGVSKHRSIGGWLSTAKYFAKRLPSSTDIQAIHNRKIVLRRCTSVQPPGHNVDLKSKLCLISNDKDNQTELGDSEFKSRKSTSMMVENTKHMSKRSIESVREEFSTCAQEGLGWPLLHKPTSAIVEARHAARHSRSISVVQWVMSLPDRSPQQSPHYYQIKETPFETNHRYNEDDSSKISSNSSEISNGLEDTLKLKSSACKFFSYELLCTCTSQFSSGTLIGKGGSNRVYRGNLPDGKQVAVKVLQSSKEARKDFAREVEIISSLKHKNITSLFGISIEDNALISVYEYFPRGSLEENLHGKTSHESCLSWEARFNIAIGVAEALHYLHKECPKSVIHRDVKSSNILLSDKLEPQLSDFGLAIWGPTTSTSLTQEDIVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGRKPIGSETPKGQESLVMWARPIIKNGDVKDLLDPNLDDKFNAVEMQRMVLAASLCITRAARIRPQIDQILEILKGDKDVNKFRNPQVDNHEDSEEQENTDDDEVYPNSSADLHRSLALLDVEDDTTSFSSLERSSPYLEEDLKSRCSRSSSNFD* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00474 675 SMART serkin_6 323 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00474 675 SUPERFAMILY Protein kinase-like (PK-like) 305 594 IPR011009 -
Pte18g00474 675 MobiDBLite consensus disorder prediction 602 629 - -
Pte18g00474 675 Pfam Protein kinase domain 325 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00474 675 FunFam Putative receptor-like serine/threonine-protein kinase 398 610 - -
Pte18g00474 675 Pfam Universal stress protein family 12 131 IPR006016 -
Pte18g00474 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Pte18g00474 675 Gene3D Phosphorylase Kinase; domain 1 294 397 - -
Pte18g00474 675 PANTHER OS08G0249100 PROTEIN 173 623 IPR046958 -
Pte18g00474 675 MobiDBLite consensus disorder prediction 646 675 - -
Pte18g00474 675 ProSiteProfiles Protein kinase domain profile. 323 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00474 675 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 292 397 - -
Pte18g00474 675 Gene3D Transferase(Phosphotransferase) domain 1 398 623 - -
Pte18g00474 675 Gene3D HUPs 12 134 IPR014729 -
Pte18g00474 675 CDD USP_Like 14 101 - -
Pte18g00474 675 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00474 Pte-Chr18 10343780 10346661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00474 305 605 Trihelix Transcription Factor Family AT1G70460 44.118 6.05e-77 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte18g00474 Pkinase 8.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00474 - - cave:132166429 775.007