Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00448 ATGCGTGGTGCGTTTACAACAATTCAAGGAAATTGCTCATCATTAAGATTGAAGACACCTCATTCCTGTGAAAAAAGCCCTGTCGTGATGGATCTCAGTACCGATACCTCAGAAGAGAACAGGACAGAGGACTGCTGCCATGGTGGCTTTCTTTCTGCCTGGGCTATTGATCCTTCGAAGTCATTTAGTTCCTTCGAAATTACAGTAGGGAACTTGGAAATTAATACTACTGGAAATGCTCCTCAGAATCTTACTTTGTTGGCACCAGGTCCTGGCTACACATGTAGTCCAGTAGTGGAAACCGATCCCTCAGTGTCTTCTGTTATTGATGGGAGAAGACAAGAGCAGGTTTTCAGAACATGGAAATCTACTTGCACTTACTCTTCTTTTCTGGCAAACAAGAAACCAGTATGTTGTGTTTCAATGTCAGCATTTTACAGTCATACAATCACATCATGTCCTAAATGCAGTTGCGGATGCAGAGAAACAGAGAATACTACATCTTGTATAAGATTCTTATCTTCCTCTCCTAGCAGTGAGGATCCCTCGTCAGTGACAGATGATGCAGTAGGCTGCACTGATCACATGTGCCCAGTTCGTGTCCATTGGCATGTGAAAAACAATTATAAGCATCATTGGAGGGTGAAACTCACAGCTTCTAGTTTCTTCTTCAAGAAAAACTACTCAGACTGGAATATATTGGTTCAGCATCCTGGTTTTAACCAATCTGCAAAAGTATATAGTTTCAACAGCACAATACTCCCCACAGTTGGGCTTGAAGATGAGGCTGCTCTCTTTTGGGGGAAGGATTTCTACAACACTATACTATTGCATTCAGACAAGGATAGACTTGGATCAGTATCAACAGAAATACTATTGAAAAAAGATTTGGGGGACTTCACATTGCGTAATGGTTGGGCATTCCCTCGAAGGATATACTTCGATGGTGAGAACTGTGAGATGACTTTGCCAGACACGTTCCCTATGCTACCAAATGGTGCCAGCAATTTGAGACTTACTGTGTGCCATTTGCTTCTTATTTTTCTGTCATATTTTAGCATCAGGGGATTGCAATAA 1077 0.4178 MRGAFTTIQGNCSSLRLKTPHSCEKSPVVMDLSTDTSEENRTEDCCHGGFLSAWAIDPSKSFSSFEITVGNLEINTTGNAPQNLTLLAPGPGYTCSPVVETDPSVSSVIDGRRQEQVFRTWKSTCTYSSFLANKKPVCCVSMSAFYSHTITSCPKCSCGCRETENTTSCIRFLSSSPSSEDPSSVTDDAVGCTDHMCPVRVHWHVKNNYKHHWRVKLTASSFFFKKNYSDWNILVQHPGFNQSAKVYSFNSTILPTVGLEDEAALFWGKDFYNTILLHSDKDRLGSVSTEILLKKDLGDFTLRNGWAFPRRIYFDGENCEMTLPDTFPMLPNGASNLRLTVCHLLLIFLSYFSIRGLQ* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00448 358 Pfam COBRA-like protein 1 128 IPR006918 GO:0010215|GO:0016020
Pte18g00448 358 PIRSF COBRA 1 355 IPR006918 GO:0010215|GO:0016020
Pte18g00448 358 PANTHER PROTEIN COBRA 1 347 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00448 Pte-Chr18 10077862 10080862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00448 1 350 COBRA Gene Family AT3G29810 46.742 1.85e-112 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00448 - - qsa:O6P43_011508 508.834