Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00437 ATGAAGAATTTAAGCATCTTATTCATCTTATCCATAGCGGTCTTTTTCTTCTCAGCAACGTTGTCTCATGTTCGTGCTGACCTACAAGCCGATAAACAAGCTCTACTTGATTTTATTCAAGGAGTACCTCATTCACATTATTTGAACTGGAATCAGATGCTCTCCATATGCATAAACTGGACAGGAGTGATATGCAGCAACGACCATTCAAGAGTGATCGGCCTTAGATTGTCAGGAGTGGGACTGCAAGGTCCAATACCATCAAACACCCTCAGTCGCCTGTCAGAAATTCGAACTCTCAGTCTTAGTTCCAATGCTGTATCAGGCCCTTTCCCTTCTGATTTTTCCAATCTCAAAAACTTAACCTACCTTCACCTTGACTCTAATAACTTCTCCGGTCCATTACCGAATGAATTTTCAGCTTGGAAGAATATTACTGTTGCCAATTTATCTAGTAATGATTTCAGTGGAAGCATCCCTCCTTCAGTTTCAAATTTGACAAATCTCAGGTCATTAGACCTCTCTGACAACTCATTTTCCGGCAAAATTCCTGATCTTCAACTTCCAGCTCTGCAAGAGCTAAATTTAGCAAACAATAATCTCACTGGAATTGTGCCAAAATCCCTTCAGAGATTTCCATCAGATGCATTTTCTGGTAACAACATTTCCTCACTACATGCCCTTTCTCCGGCTTTTCCAATTCCACCAACAAGTCTTCACCTACTGAAGACGCATACAGAATTAAAAAAACCGGTAATATTGGGTATCGTCATAGGAAGTTGTGTACTGGCATTTGTCGCGATTGCAGCTCTTTTCATTGGTTGCTCATCAAAAAAAGGAAGCGAAGATGCACAGGCATCACAAGAGAAGAAACCACAGAACAAAATCGTCATGAGAAAAGCAGCTTCAGAGAGCAAAGATAAGAATAATGGGATAGTTTTCTTTGAGGGTTGTGATTTTGCATTTGACCTCGAGGACTTGTTGAGAGCATCGGCTGAGATACTAGGAAAGGGTACCTATGGAATGACGTATAGGGCTGGTTTAGAAGATTTAACAACAGTAGTGGTGAAGAGATTGAAAGAAGTAACTGTTGGAAAACGAGAGTTTGAGCAGCAGATGGATGTGGTTGGAAGAATTAAGCATGATAATGTGGCTGCAATAAGAGCATATTACTATTCAAAGGATGAGAAACTCATTATGCATGATTACTTTGAGCAGGGTAGTATCTCTGCAATATTGCATGGTAACAGAGGTGAGGGCATCAGGACACCTTTAGACTGGGATAGTCGGCTGAGGATTGCGATTGGTACAGCCAGAGGCATTTCTAATATCCACATGCAAAATGGTGGGAAGTTTGTACATGGGAACATAAAAGCTGCTAATATTTTCCTAAACTCCCAAGGATATGGTTGTGTCTCAGAAATTGGTTTAGCAACTTTGACAAGTCCAATTCCACAGCCAGCGCTTCAATTTGCAGGATACCGTGCCCCAGAAGTAACAGACACTCGCAGATCAACACAAGCATCTGATGTGTTTAGTTTCGGCGTGTTCTTACTTGAACTTTTGACTGGAAAATCCCCCATACATACCACGAAAAATGAGGAGATTGTTTATTTGGTCAGGTGGGTGCATTCTGTGGTCAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTAGAGCTTTTGAGGTATCCGAACATAGAAGAAGAAATGGTACAAATGTTACAAATAGCAATGGCTTGTGTGGATAGGATAGCAGAGCAGAGACCTGTAATGTTAGAAGTTGTGAGAATGGTAGAGGATATCCGTCAAGTACAAACTGAGAATAGGCCATCATCATCATCCACATCAGAATTGTCAACCCAAAATGCAGTACCTCAAGCAAATCAGATGGATTTGTCCTCTGTGCCCCAGTGA 1914 0.4138 MKNLSILFILSIAVFFFSATLSHVRADLQADKQALLDFIQGVPHSHYLNWNQMLSICINWTGVICSNDHSRVIGLRLSGVGLQGPIPSNTLSRLSEIRTLSLSSNAVSGPFPSDFSNLKNLTYLHLDSNNFSGPLPNEFSAWKNITVANLSSNDFSGSIPPSVSNLTNLRSLDLSDNSFSGKIPDLQLPALQELNLANNNLTGIVPKSLQRFPSDAFSGNNISSLHALSPAFPIPPTSLHLLKTHTELKKPVILGIVIGSCVLAFVAIAALFIGCSSKKGSEDAQASQEKKPQNKIVMRKAASESKDKNNGIVFFEGCDFAFDLEDLLRASAEILGKGTYGMTYRAGLEDLTTVVVKRLKEVTVGKREFEQQMDVVGRIKHDNVAAIRAYYYSKDEKLIMHDYFEQGSISAILHGNRGEGIRTPLDWDSRLRIAIGTARGISNIHMQNGGKFVHGNIKAANIFLNSQGYGCVSEIGLATLTSPIPQPALQFAGYRAPEVTDTRRSTQASDVFSFGVFLLELLTGKSPIHTTKNEEIVYLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVQMLQIAMACVDRIAEQRPVMLEVVRMVEDIRQVQTENRPSSSSTSELSTQNAVPQANQMDLSSVPQ* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00437 637 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Pte18g00437 637 Gene3D Ribonuclease Inhibitor 141 256 IPR032675 -
Pte18g00437 637 FunFam Probable inactive receptor kinase RLK902 28 186 - -
Pte18g00437 637 SUPERFAMILY L domain-like 41 225 - -
Pte18g00437 637 Gene3D Phosphorylase Kinase; domain 1 294 403 - -
Pte18g00437 637 ProSiteProfiles Protein kinase domain profile. 329 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00437 637 Gene3D Transferase(Phosphotransferase) domain 1 404 625 - -
Pte18g00437 637 Gene3D Ribonuclease Inhibitor 29 140 IPR032675 -
Pte18g00437 637 MobiDBLite consensus disorder prediction 282 302 - -
Pte18g00437 637 SMART LRR_typ_2 118 141 IPR003591 -
Pte18g00437 637 SMART LRR_typ_2 166 186 IPR003591 -
Pte18g00437 637 SMART LRR_typ_2 188 211 IPR003591 -
Pte18g00437 637 ProSitePatterns Protein kinases ATP-binding region signature. 335 366 IPR017441 GO:0005524
Pte18g00437 637 PANTHER OS05G0588300 PROTEIN 7 613 - -
Pte18g00437 637 MobiDBLite consensus disorder prediction 283 302 - -
Pte18g00437 637 Pfam Protein tyrosine and serine/threonine kinase 333 595 IPR001245 GO:0004672|GO:0006468
Pte18g00437 637 Pfam Leucine Rich Repeat 168 185 IPR001611 GO:0005515
Pte18g00437 637 Pfam Leucine Rich Repeat 191 211 IPR001611 GO:0005515
Pte18g00437 637 FunFam pollen receptor-like kinase 1 298 403 - -
Pte18g00437 637 ProSiteProfiles Leucine-rich repeat profile. 168 190 IPR001611 GO:0005515
Pte18g00437 637 MobiDBLite consensus disorder prediction 605 637 - -
Pte18g00437 637 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 404 612 - -
Pte18g00437 637 SUPERFAMILY Protein kinase-like (PK-like) 333 598 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00437 Pte-Chr18 9911688 9913698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00437 26 624 Receptor kinase-like Gene Family AT4G23740 52.488 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte18g00437 PK_Tyr_Ser-Thr 2.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00437 - - qsa:O6P43_015051 806.208