Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00418 ATGGCTTCAACTGAGAAATTCGACGACCCTGTAAAGGTCTTAGCTGGTTTCCTTCTACGGTTTTGCTCAAACCAGCTACGTTCCATCGCGCTCTGTCCGGATTCTAAGCTCCATTACCCGCTCTATGTCGATTTTGCAGAGTTGATGGAAGACAACCCTCTCATTGCGAACTGTGTATTCTCCAAACCCACTGTGTATTTGCGACTTTTTGACCAGGCTGCTGCTTGGGCCCAGAATATTGCACTGGGGGATTTGAAAAAAGGTGACAGAAGTGGGATTCATGGGAAATCAATTCATGTTCGTATCAATGTCAGTGGGTCTCCACTTGAATGCCCTGAGACTTTTCCAAGCATTGGTGGTGTGAGAGTTAGGCATCATGGAATTCTTCTTACAATCAGAGGGACAGTTATCCGGTCAGGAGCAATAAAGATGTACGAAGGAGAAAGATGGTACATGTGCCACAAGTGCAAGGACAAACTCCAAGTTTTTCCTGAGTTGGAAGCTAGAAATTCTATATCACTGCCTTCAGTTTGCCCTATACTGAATCCTAAACCATGTGGGGGCACAAAGTTTGAGTATATAGAGAACTCCATAGTCTGTCACGATTATCAAGAAATCAAAATTCAAGAAAGCACCCAAGTACTTGGTGTTGGGGCAATTCCTCGTTCAATTCCTGTCATCTTGAAGGATGACCTTGTCGATATTGTTAAAGCTGGAGATGATGTGATTGTCACTGGGATCTTAACAGCAAAGTGGTCTCCGGAATTAAAAGATGTTCGCTGTGACCTTGATCCTGTTTTAGTAGCAAATCATGTGAGGCGAACTAATGATTTCAAGTCAGAACTTGATATCCCAGATGATGATGTTATTCAATTTAAGCAGTTTTGGTTGGATTTCAATGATGCACCTTTAAAAGGTAGAAATGCTATTTTGCGAGGAATTTGTCCACAAATTTTCGGACTCTTTACGGTCAAGCTTGCAGTTGCGTTGACTCTTATTGGAGGTGTTCAACAAGTTGATGCTTCGGGAACAAAGATACGGGGAGAGTCTCATTTGCTTCTAGTCGGTGATCCTGGTACAGGCAAGTCTCAGTTCTTGAAATTTGCTGCAAAGTTAAGCAATAGGTCTGTTATTACGACTGGGTTAGGAAGCACAAGTGCAGGATTGACTGTTACTGCAGTAAAAGATGGAGGAGAGTGGATGTTAGAAGCCGGGGCACTTGTTCTTGCAGATGGAGGACTTTGTTGCATAGATGAATTTGACAGTATGAGGGAACATGACAGGGCTACTATCCATGAAGCAATGGAGCAGCAGACGATAAGCGTTGCTAAGGCTGGTCTGGTAACTACACTCAGCACTAGAACCATTGTATTTGGAGCAACGAATCCTAAGGGACAATATGATCCTGATCAACCTCTCTCTGTCAACACCACACTTTCTGGTCCTCTATTAAGCAGATTCGATATAGTCCTCGTCCTCTTGGATACAAAGAATCCTGAGTGGGATGCAGTTGTTTCATCCCACATTTTGGCTCAGGCTGAATCAGAAAAAACTAGGCATGGTGGAGATCTAGCAAATATCTGGTCACTTCCCATGCTTAAGAGGTACATACACTTTGTCAAGGAAAACTTCAGGCCAGGTCTAACAAGAGAGGCTGAAATTGTCATATCCAGCTATTATCAACTCCAAAGGAAATCTGCAACTCATAATGCAGCTAGGACAACTGTGCGCATGCTGGAGAGTTTGATACGCTTAGCTCAAGCTCATGCAAGGCTTATGTTCAGAAATAAGGTGACAAGGTTGGATGCCATTACTGCAATTTTGTGCATTGAATCTTCAATGACTACCTCAGCCATTGTTGATACTATTGGGAATGCTCTGCACACCAATTTTACTGACAACCCCGATGAAGACTATGCCAAGCAAGAAAAGCTCATCATCGAGAAGTTGCAATCAGATGATTTTTCTACCATGAGCGACATTCAAGGTTTGTGCAGATGA 2001 0.4308 MASTEKFDDPVKVLAGFLLRFCSNQLRSIALCPDSKLHYPLYVDFAELMEDNPLIANCVFSKPTVYLRLFDQAAAWAQNIALGDLKKGDRSGIHGKSIHVRINVSGSPLECPETFPSIGGVRVRHHGILLTIRGTVIRSGAIKMYEGERWYMCHKCKDKLQVFPELEARNSISLPSVCPILNPKPCGGTKFEYIENSIVCHDYQEIKIQESTQVLGVGAIPRSIPVILKDDLVDIVKAGDDVIVTGILTAKWSPELKDVRCDLDPVLVANHVRRTNDFKSELDIPDDDVIQFKQFWLDFNDAPLKGRNAILRGICPQIFGLFTVKLAVALTLIGGVQQVDASGTKIRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGQYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAQAESEKTRHGGDLANIWSLPMLKRYIHFVKENFRPGLTREAEIVISSYYQLQRKSATHNAARTTVRMLESLIRLAQAHARLMFRNKVTRLDAITAILCIESSMTTSAIVDTIGNALHTNFTDNPDEDYAKQEKLIIEKLQSDDFSTMSDIQGLCR* 667
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00418 666 CDD MCM9 309 613 - -
Pte18g00418 666 Gene3D - 121 250 IPR012340 -
Pte18g00418 666 PRINTS Mini-chromosome maintenance (MCM) protein family signature 433 446 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g00418 666 PRINTS Mini-chromosome maintenance (MCM) protein family signature 456 468 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g00418 666 PRINTS Mini-chromosome maintenance (MCM) protein family signature 405 419 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g00418 666 PRINTS Mini-chromosome maintenance (MCM) protein family signature 347 362 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g00418 666 PRINTS Mini-chromosome maintenance (MCM) protein family signature 483 491 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g00418 666 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 40 652 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pte18g00418 666 Pfam MCM P-loop domain 308 511 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g00418 666 Pfam MCM AAA-lid domain 532 613 IPR041562 -
Pte18g00418 666 Gene3D - 145 201 - -
Pte18g00418 666 ProSiteProfiles MCM family domain profile. 306 509 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pte18g00418 666 SUPERFAMILY Nucleic acid-binding proteins 38 257 IPR012340 -
Pte18g00418 666 Gene3D - 291 619 IPR027417 -
Pte18g00418 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 316 620 IPR027417 -
Pte18g00418 666 FunFam Probable DNA helicase MCM9 284 618 - -
Pte18g00418 666 Pfam MCM OB domain 121 249 IPR033762 -
Pte18g00418 666 SMART mcm 114 615 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pte18g00418 666 SMART AAA_5 348 497 IPR003593 GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte18g00418 Pte-Chr18 9596986 9608653 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00418 1 638 Core DNA Replication Machinery Family AT2G14050 73.906 0.0 980
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00418 K10738 - qsu:111990150 1090.1