Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte18g00418 | ATGGCTTCAACTGAGAAATTCGACGACCCTGTAAAGGTCTTAGCTGGTTTCCTTCTACGGTTTTGCTCAAACCAGCTACGTTCCATCGCGCTCTGTCCGGATTCTAAGCTCCATTACCCGCTCTATGTCGATTTTGCAGAGTTGATGGAAGACAACCCTCTCATTGCGAACTGTGTATTCTCCAAACCCACTGTGTATTTGCGACTTTTTGACCAGGCTGCTGCTTGGGCCCAGAATATTGCACTGGGGGATTTGAAAAAAGGTGACAGAAGTGGGATTCATGGGAAATCAATTCATGTTCGTATCAATGTCAGTGGGTCTCCACTTGAATGCCCTGAGACTTTTCCAAGCATTGGTGGTGTGAGAGTTAGGCATCATGGAATTCTTCTTACAATCAGAGGGACAGTTATCCGGTCAGGAGCAATAAAGATGTACGAAGGAGAAAGATGGTACATGTGCCACAAGTGCAAGGACAAACTCCAAGTTTTTCCTGAGTTGGAAGCTAGAAATTCTATATCACTGCCTTCAGTTTGCCCTATACTGAATCCTAAACCATGTGGGGGCACAAAGTTTGAGTATATAGAGAACTCCATAGTCTGTCACGATTATCAAGAAATCAAAATTCAAGAAAGCACCCAAGTACTTGGTGTTGGGGCAATTCCTCGTTCAATTCCTGTCATCTTGAAGGATGACCTTGTCGATATTGTTAAAGCTGGAGATGATGTGATTGTCACTGGGATCTTAACAGCAAAGTGGTCTCCGGAATTAAAAGATGTTCGCTGTGACCTTGATCCTGTTTTAGTAGCAAATCATGTGAGGCGAACTAATGATTTCAAGTCAGAACTTGATATCCCAGATGATGATGTTATTCAATTTAAGCAGTTTTGGTTGGATTTCAATGATGCACCTTTAAAAGGTAGAAATGCTATTTTGCGAGGAATTTGTCCACAAATTTTCGGACTCTTTACGGTCAAGCTTGCAGTTGCGTTGACTCTTATTGGAGGTGTTCAACAAGTTGATGCTTCGGGAACAAAGATACGGGGAGAGTCTCATTTGCTTCTAGTCGGTGATCCTGGTACAGGCAAGTCTCAGTTCTTGAAATTTGCTGCAAAGTTAAGCAATAGGTCTGTTATTACGACTGGGTTAGGAAGCACAAGTGCAGGATTGACTGTTACTGCAGTAAAAGATGGAGGAGAGTGGATGTTAGAAGCCGGGGCACTTGTTCTTGCAGATGGAGGACTTTGTTGCATAGATGAATTTGACAGTATGAGGGAACATGACAGGGCTACTATCCATGAAGCAATGGAGCAGCAGACGATAAGCGTTGCTAAGGCTGGTCTGGTAACTACACTCAGCACTAGAACCATTGTATTTGGAGCAACGAATCCTAAGGGACAATATGATCCTGATCAACCTCTCTCTGTCAACACCACACTTTCTGGTCCTCTATTAAGCAGATTCGATATAGTCCTCGTCCTCTTGGATACAAAGAATCCTGAGTGGGATGCAGTTGTTTCATCCCACATTTTGGCTCAGGCTGAATCAGAAAAAACTAGGCATGGTGGAGATCTAGCAAATATCTGGTCACTTCCCATGCTTAAGAGGTACATACACTTTGTCAAGGAAAACTTCAGGCCAGGTCTAACAAGAGAGGCTGAAATTGTCATATCCAGCTATTATCAACTCCAAAGGAAATCTGCAACTCATAATGCAGCTAGGACAACTGTGCGCATGCTGGAGAGTTTGATACGCTTAGCTCAAGCTCATGCAAGGCTTATGTTCAGAAATAAGGTGACAAGGTTGGATGCCATTACTGCAATTTTGTGCATTGAATCTTCAATGACTACCTCAGCCATTGTTGATACTATTGGGAATGCTCTGCACACCAATTTTACTGACAACCCCGATGAAGACTATGCCAAGCAAGAAAAGCTCATCATCGAGAAGTTGCAATCAGATGATTTTTCTACCATGAGCGACATTCAAGGTTTGTGCAGATGA | 2001 | 0.4308 | MASTEKFDDPVKVLAGFLLRFCSNQLRSIALCPDSKLHYPLYVDFAELMEDNPLIANCVFSKPTVYLRLFDQAAAWAQNIALGDLKKGDRSGIHGKSIHVRINVSGSPLECPETFPSIGGVRVRHHGILLTIRGTVIRSGAIKMYEGERWYMCHKCKDKLQVFPELEARNSISLPSVCPILNPKPCGGTKFEYIENSIVCHDYQEIKIQESTQVLGVGAIPRSIPVILKDDLVDIVKAGDDVIVTGILTAKWSPELKDVRCDLDPVLVANHVRRTNDFKSELDIPDDDVIQFKQFWLDFNDAPLKGRNAILRGICPQIFGLFTVKLAVALTLIGGVQQVDASGTKIRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGQYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAQAESEKTRHGGDLANIWSLPMLKRYIHFVKENFRPGLTREAEIVISSYYQLQRKSATHNAARTTVRMLESLIRLAQAHARLMFRNKVTRLDAITAILCIESSMTTSAIVDTIGNALHTNFTDNPDEDYAKQEKLIIEKLQSDDFSTMSDIQGLCR* | 667 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte18g00418 | 666 | CDD | MCM9 | 309 | 613 | - | - | |
Pte18g00418 | 666 | Gene3D | - | 121 | 250 | IPR012340 | - | |
Pte18g00418 | 666 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 433 | 446 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g00418 | 666 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 456 | 468 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g00418 | 666 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 405 | 419 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g00418 | 666 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 347 | 362 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g00418 | 666 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 483 | 491 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g00418 | 666 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 40 | 652 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g00418 | 666 | Pfam | MCM P-loop domain | 308 | 511 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g00418 | 666 | Pfam | MCM AAA-lid domain | 532 | 613 | IPR041562 | - | |
Pte18g00418 | 666 | Gene3D | - | 145 | 201 | - | - | |
Pte18g00418 | 666 | ProSiteProfiles | MCM family domain profile. | 306 | 509 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g00418 | 666 | SUPERFAMILY | Nucleic acid-binding proteins | 38 | 257 | IPR012340 | - | |
Pte18g00418 | 666 | Gene3D | - | 291 | 619 | IPR027417 | - | |
Pte18g00418 | 666 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 316 | 620 | IPR027417 | - | |
Pte18g00418 | 666 | FunFam | Probable DNA helicase MCM9 | 284 | 618 | - | - | |
Pte18g00418 | 666 | Pfam | MCM OB domain | 121 | 249 | IPR033762 | - | |
Pte18g00418 | 666 | SMART | mcm | 114 | 615 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Pte18g00418 | 666 | SMART | AAA_5 | 348 | 497 | IPR003593 | GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte18g00418 | Pte-Chr18 | 9596986 | 9608653 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte18g00418 | 1 | 638 | Core DNA Replication Machinery Family | AT2G14050 | 73.906 | 0.0 | 980 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte18g00418 | K10738 | - | qsu:111990150 | 1090.1 |