Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00416 ATGCCAGCATTATCAGCTACTTCATTTTACTCTACTTTCTGCTGCAAATCCCACAGCACATCTTCGTCCCCTCTTCCAAATTCTGAGCAATTACAGATTACCCATCTGTCTGCAAAACCCAAAAGCCTGCTTCAAAATCATCCTCTTTACTCATCAACTCAAGCAAAAGTACCCCTCCAATTCAAAGAGAAAATACTATGCCTTGAGATAATGGGTGTGGATGCAGGCAAGGCTTTGTCTCAGAACCCTTCTCTTCACACTGCCACTCTAGAGTCTCTCCATTCTGTCATTTCATTCCTAAAATCGAAAGGCATACTTGAAACGGATCTGCCTAGAATATTTGGCATGTGCCCACAGATACTCACCGCTAACATTGAAACCCATCTCATCCCAGTTTTTGATTTCCTCTCACGTGACCTCAAAGTCCCAGAATATAGGTTTAGGAAAGTTATTAACAAGTGTCCAAGATTTCTTGTTTCAAGTGTGAGAGACCAGCTGAAGCCAGCTCTGTTTTATTTACAGAGGCTAGGGTTCAAAGATATGGAAGTATTGGCGTACAATGATCCCATATTATTGGTTTCTAGTGTGGAAAATACTCTGATTCCTAAGCTCAAGTATTTGGAGAGTGTGGGGTTTGCAAAGGATGAGGCTATAGGAATGGTTCTAAGATGTCCTCCATTGTTTACTTTCAGCATTGAAAATAATTTCAAGCCAAAGTTTGAGTATTTTTCTGGAGAGATGGGGAGGCATCTGGAAGAACTGAAAGAGTTTCCTCAATATTTTGCTTTCAGTTTGGATAACAGGATAAGGCCTAGACACATGGAGGCTGAACAGGTTGGGATCACATTGCCATTGCCTCTTATGCTTAGGAGTACGGATGTGGAGTTCAAGAATTTGATAAAGGCAAGAAGTAGATCACTATAG 924 0.4113 MPALSATSFYSTFCCKSHSTSSSPLPNSEQLQITHLSAKPKSLLQNHPLYSSTQAKVPLQFKEKILCLEIMGVDAGKALSQNPSLHTATLESLHSVISFLKSKGILETDLPRIFGMCPQILTANIETHLIPVFDFLSRDLKVPEYRFRKVINKCPRFLVSSVRDQLKPALFYLQRLGFKDMEVLAYNDPILLVSSVENTLIPKLKYLESVGFAKDEAIGMVLRCPPLFTFSIENNFKPKFEYFSGEMGRHLEELKEFPQYFAFSLDNRIRPRHMEAEQVGITLPLPLMLRSTDVEFKNLIKARSRSL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00416 307 FunFam Transcription termination factor MTEF1, chloroplastic 136 304 - -
Pte18g00416 307 PANTHER CGI-12 PROTEIN-RELATED 83 228 IPR003690 GO:0003690|GO:0006355
Pte18g00416 307 Gene3D Transcription termination factor 3, mitochondrial 165 304 IPR038538 -
Pte18g00416 307 Pfam mTERF 189 297 IPR003690 GO:0003690|GO:0006355
Pte18g00416 307 Pfam mTERF 58 183 IPR003690 GO:0003690|GO:0006355
Pte18g00416 307 SMART mt_12 111 143 IPR003690 GO:0003690|GO:0006355
Pte18g00416 307 SMART mt_12 76 106 IPR003690 GO:0003690|GO:0006355
Pte18g00416 307 SMART mt_12 251 282 IPR003690 GO:0003690|GO:0006355
Pte18g00416 307 SMART mt_12 218 250 IPR003690 GO:0003690|GO:0006355
Pte18g00416 307 SMART mt_12 182 213 IPR003690 GO:0003690|GO:0006355
Pte18g00416 307 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00416 Pte-Chr18 9578599 9579964 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte18g00416 mTERF 1.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00416 K15031 - qsu:112032944 424.861