Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00409 ATGGAAAGGAACTGCAACTTGGAACTTCACCTTCATCTTCCAGTGTCTGACACAGATCATCATCACAATCGGTACAACACCCATTGCAGCCAATCCATGGTACGGAAAGAGAATGAAAGTCTGCAACATCAGGAGAAGCTTGCCCTAGTCTACAATAGAAACGTCAGTGCTTGTGATGCTACAGAGCTGCAGACTAGAGCTATATTCAGTACTCTTGCAAGAAGAGAAGGCGATGATAGAGTACAGAAGAATCCAACTCCAGCATCAAAAGTACCATCTTCTCTAACACTGCAGTCTCGTCCTCCTCCTCAATTCTATAATCCAAGCATTGGCCTTTCTATGAGAAGATCTTTACAACGGTTCTTACAAAAGAGAAAGAGTCGGGTTCAAGACGCATCTCCATACAACCTAGTCAATTAG 420 0.4333 MERNCNLELHLHLPVSDTDHHHNRYNTHCSQSMVRKENESLQHQEKLALVYNRNVSACDATELQTRAIFSTLARREGDDRVQKNPTPASKVPSSLTLQSRPPPQFYNPSIGLSMRRSLQRFLQKRKSRVQDASPYNLVN* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00409 139 MobiDBLite consensus disorder prediction 86 110 - -
Pte18g00409 139 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 32 136 IPR040390 -
Pte18g00409 139 MobiDBLite consensus disorder prediction 74 110 - -
Pte18g00409 139 Pfam Jas motif 115 135 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00409 Pte-Chr18 9368083 9369088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00409 1 135 Tify Gene Family AT1G30135 32.353 5.78e-11 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte18g00409 Jas_motif 1.4e-08 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00409 - - jcu:105634005 112.079