Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00401 ATGACAATCATCAAAACCTCTTTCTCAGTATATTTCAAGGAAGTTATCCATGTTGCACCATCAAAACCAACACCAAATGTCATCCTTCCGCTGTCTACCATCGACAGTGATTACGATCATGACGTGCCCGCTTACATTGTTCGAGTTTATAGAGGAAGATTGGATTGTGACCTTAATCCAGCTGATGTGATGAGAGAAGCTCTCTCTAAAGCTTTGGTGTATTACTACCCATTGGCAGGCAAGCTCAAACGCCAAGAGCATGGAAGACTCTACGCTAATTGCAACGCAGCCGGGGTGCCATTTGTGGTGGCATCAGCCAATTGTAAGCTATCCGATGTCAATTACATTGATGGGGTAGAGATTAGATATGCAAAAGACTTGGTTTACGATTTCCCACCAGAAGATGAGACTGGAAAGCATTCAATGGTTCTGCAAATCACAACGTTTCTATGTGGAGGTTTTACAATTGGATTCGGCGTATCGCATGCTATCTGCGATGGAATTGGCGCGGTTCAAATATTAAACGCACTTACTGAGCTTGCAAGCGGGATGAGTGAGCCCTCAGTGATACCTGTGTGGGAGAGGGAAAGATTGAATGGTTCAGTTTTCAAGCAACCAGTTCATCTTCCAGTGGATCCAGCTACTGCAGCAGTTTCACCGTATTTGCCAACTACTGATCTCGTGTTGCAGTGTTTTCATGTGGATAACAACAGTCTAAGGAATCTTAAATTCAGTTTGATGAAGGAAAATGGGGATCCTACACTGAGGGACAGCAGCTTTACAACTTATGAAGTCCTGGCTGCCTATTTATGGCGATCAAAATGTAAAGCTTTGAAATTGAATGATGAAGGTGAAACATTGCTATGGATAGGGGTTGGAATAAGGAAAAGGATGCATCCTCCATTGCCTGTGGGCTATTATGGAAACGCATACGTATCGCATCACCATGTAATGAAAGTAAAGGATCTAGTAGCAGGACCACTTTTGAATGTTGTGAAGCAAGTGAAGGAGTTAAAAAACCATGCTTGCAGTGATATTGAATTCATGAGGAACGCACTCAATTATTCAGAAACAATAAGACGACTAGAAATTAATCCTGAAACATATGAAGGTGGAGTTACAGATATTGTAGACTGGAGGCAATTGGGAGCTACGGAAGATGTGGATTTTGGATGGGGAAAATCAGTAAATTGTGTTACAACTGCAAAAAACATGCTGGACGATCTCAACATATGTATCATTGCACCTCCTTCTTCTCTACATCCTTCCATTGGAGATGGAGTTAGAGTTTTTGTCATTCTCCCCAGTGCATGCATCACAACATTCAAACAGGAACTTGATGCCTTGAAAGACAGTCATGCAATGAAGGGTAGTGACTCAACGATCACATCTTACTAA 1398 0.4206 MTIIKTSFSVYFKEVIHVAPSKPTPNVILPLSTIDSDYDHDVPAYIVRVYRGRLDCDLNPADVMREALSKALVYYYPLAGKLKRQEHGRLYANCNAAGVPFVVASANCKLSDVNYIDGVEIRYAKDLVYDFPPEDETGKHSMVLQITTFLCGGFTIGFGVSHAICDGIGAVQILNALTELASGMSEPSVIPVWERERLNGSVFKQPVHLPVDPATAAVSPYLPTTDLVLQCFHVDNNSLRNLKFSLMKENGDPTLRDSSFTTYEVLAAYLWRSKCKALKLNDEGETLLWIGVGIRKRMHPPLPVGYYGNAYVSHHHVMKVKDLVAGPLLNVVKQVKELKNHACSDIEFMRNALNYSETIRRLEINPETYEGGVTDIVDWRQLGATEDVDFGWGKSVNCVTTAKNMLDDLNICIIAPPSSLHPSIGDGVRVFVILPSACITTFKQELDALKDSHAMKGSDSTITSY* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00401 465 Pfam Transferase family 10 447 - -
Pte18g00401 465 Gene3D - 4 208 IPR023213 -
Pte18g00401 465 Gene3D - 217 446 IPR023213 -
Pte18g00401 465 PANTHER ACYL TRANSFERASE 4 8 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00401 Pte-Chr18 9103345 9104742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00401 47 396 Monolignol Biosynthesis Gene Families AT5G48930 32.044 7.62e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00401 K20240 - gmx:100801843 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00401 18 9103345 9104742 Pte18g00401 18 9103345 9104742 RCT