Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00395 ATGTGGATGGTGGGATATAACAATGATGATGGAGAATATAACATGGCTCATGAATCATTTCATGGCCGGAAACATCGACCTCTTGTTCCAAGGCCAGTGAGTTATAACAACGCCACTACTTCTGCAGCTAATCCATCTATAAATATCTTTCATGGCAATGATCTCTTTCCACAATATCACAATCTGGCTCATGTGACTGAGCAAAGTAAGTGTAGAGAGTTGGATAGTCAATCAGTTGTAATGAGCTCCTCAAGGTGGAATCCAACCCCAGAGCAGTTGAGAGCTCTAGAAGAGTTGTTTCATAGAGGGACTAGGACTCCATCAGCAGAGCAAATTCAAAACATCACAGCACAGCTTCGTAGGTTTGGTAAGATTGAAGGCAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCTAGAGAAAGACAGAAACGCCGCCGCCAAATGGAATCATCTGCTAACCAGGCTACAGGTTACCGTAACAATATGGACCATATCGCACCGAAGAAAGAATCAGGTGGGAGGAATAGGTCTGTGTTTGAAGGTGACCAGACCAAGAACAACCGGGATTCTTTTTCAATGCAGAGGACAGCAAAGGCAACAGTGGCAGAATATAGACCAGATATATGGACTCAATTTGATGAAGCAGAACTGAAACAAAGAAACTTTGCAGAAAGGAATGGCATGTGGCAAAGGATGCAGCTGTCTTGTCCAAATACGCATCCTCCTGCTGCTGCTCCTGCCACCCACCTCATTAACACAGCTGCTGCTACTTCTTGGCCTGCTCACACTATTACTTCAATCACAGGATCAACTAGGGCATTGGACCCAAAGCTCAATAGGGCACAACATGATGATCACGGTTTTTCCAAAGCACCCTACAGAGCAAACATTGGTTTTATTCACCTTAACAGTATCAATGACATAGTTGACCAAGATAACTGTGTGGAATCTCAAACGCTTCAACTTTTCCCGCTGGGTGGGGATGACAGTGAGGAAATTTACGACAAAGAAGGCAGTGAACTATCTCTTTCAGCTGCAATGAATGCTAACTTCAGCACCCAAAGCCACTTCTTTGAGTTTCTCCCATTGCGGAACTAA 1101 0.4378 MWMVGYNNDDGEYNMAHESFHGRKHRPLVPRPVSYNNATTSAANPSINIFHGNDLFPQYHNLAHVTEQSKCRELDSQSVVMSSSRWNPTPEQLRALEELFHRGTRTPSAEQIQNITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSANQATGYRNNMDHIAPKKESGGRNRSVFEGDQTKNNRDSFSMQRTAKATVAEYRPDIWTQFDEAELKQRNFAERNGMWQRMQLSCPNTHPPAAAPATHLINTAAATSWPAHTITSITGSTRALDPKLNRAQHDDHGFSKAPYRANIGFIHLNSINDIVDQDNCVESQTLQLFPLGGDDSEEIYDKEGSELSLSAAMNANFSTQSHFFEFLPLRN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00395 366 MobiDBLite consensus disorder prediction 141 195 - -
Pte18g00395 366 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 71 361 IPR044555 GO:0003700|GO:0099402
Pte18g00395 366 Pfam Homeodomain 83 143 IPR001356 GO:0003677
Pte18g00395 366 FunFam WUSCHEL-related homeobox 4 83 150 - -
Pte18g00395 366 CDD homeodomain 85 145 IPR001356 GO:0003677
Pte18g00395 366 MobiDBLite consensus disorder prediction 178 195 - -
Pte18g00395 366 SMART HOX_1 81 148 IPR001356 GO:0003677
Pte18g00395 366 Gene3D - 79 144 - -
Pte18g00395 366 ProSiteProfiles 'Homeobox' domain profile. 89 144 IPR001356 GO:0003677
Pte18g00395 366 SUPERFAMILY Homeodomain-like 84 149 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00395 Pte-Chr18 9032754 9034785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00395 1 367 Wox Gene Family AT3G18010 35.732 1.11e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte18g00395 Homeodomain 6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00395 - - qsa:O6P43_005181 343.969