Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00384 ATGGTCACTTCACAGGAAGGTGCAGATGGTCGTGTTTCTTCCAATGAATTCCGGTGGAAACAAAGTTTTGAAAGTGAAAATGGCGGGAGTCAGCAAATTCCAGATGAAAATATTCATACCCATACCCCTAAAGGTATAAATACTACCTCTACAAAAATAGAAGAAGCAGTTCGAGAATCTGATGCTGCTGTCTCTCGGTCCCAATTACATAGAGAAAAAAACAATTTTGAGAAAACATTAAAAACCCCTGAATCTAGTCTCCTTTCCCTGCAATCATCTAGTCTCCTTTCCCTGCAATCTAGTATGCAAGGAAGTTTTGAGAAAGTCCCGGAAGATGGATATAACTGGCGCAAGTATGGACAGAAACAAGTTAGGGGAAATGAATTCATAAAGAGCTATTACAGATGTTCCAGCCCCAACTGCCCTGCAAAAAAACAATTGGAGCGTTCCCACGATGGGCAGATAACAGATACTATGTACTTTGGTCAACATGATCATCTTAAAACTCATCCTGATATCCCAAATGCTGTTTCTTTTGATGTGACTATGGTCAAAGAAACACCCAATATGCCTTCTTCAAAAATAGGAGGACAACCTACAGTTGAACAAGGACATACACCTTCGAGAGTTTCGTCAAATGATCATGTAAAAGGCATACACTCTGGATCAATTAGGTTGCTAAAAGACAAGGCTCGTAAAGACAGGGGTCCAAAGCCCAAACGATGGAAGAAGGAAGAGGGTTATACCGATCCATCTCCATGGAAAAAGCTAACTGGTGAGCCTCGAGTTGTTGTTCAAACACGAAGTGAGGTCGATATTGTTAATGATGGGTACAGGTGGAGAAAATATGGGCAGAAACTAGTGAAAGGAAATGCAAATCCAAGGTGCTCAAGTGCTCTTTGTCCAGCTAAAAAGCATGTAGAGAGAGCATCTTATGATGCAAAAGTTGTTCTTAACTACCTATGA 966 0.4079 MVTSQEGADGRVSSNEFRWKQSFESENGGSQQIPDENIHTHTPKGINTTSTKIEEAVRESDAAVSRSQLHREKNNFEKTLKTPESSLLSLQSSSLLSLQSSMQGSFEKVPEDGYNWRKYGQKQVRGNEFIKSYYRCSSPNCPAKKQLERSHDGQITDTMYFGQHDHLKTHPDIPNAVSFDVTMVKETPNMPSSKIGGQPTVEQGHTPSRVSSNDHVKGIHSGSIRLLKDKARKDRGPKPKRWKKEEGYTDPSPWKKLTGEPRVVVQTRSEVDIVNDGYRWRKYGQKLVKGNANPRCSSALCPAKKHVERASYDAKVVLNYL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00384 321 Pfam WRKY DNA -binding domain 111 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00384 321 Pfam WRKY DNA -binding domain 275 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00384 321 ProSiteProfiles WRKY domain profile. 269 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00384 321 SMART WRKY_cls 110 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00384 321 SMART WRKY_cls 274 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00384 321 SUPERFAMILY WRKY DNA-binding domain 109 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00384 321 MobiDBLite consensus disorder prediction 187 254 - -
Pte18g00384 321 Gene3D WRKY domain 97 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00384 321 FunFam WRKY transcription factor 98 170 - -
Pte18g00384 321 Gene3D WRKY domain 261 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00384 321 SUPERFAMILY WRKY DNA-binding domain 266 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00384 321 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 318 IPR044810 GO:0003700
Pte18g00384 321 MobiDBLite consensus disorder prediction 1 50 - -
Pte18g00384 321 MobiDBLite consensus disorder prediction 221 251 - -
Pte18g00384 321 ProSiteProfiles WRKY domain profile. 105 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00384 321 MobiDBLite consensus disorder prediction 187 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00384 Pte-Chr18 8972881 8974609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00384 91 318 WRKY Transcription Factor Family AT2G04880 46.559 1.70e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte18g00384 WRKY 4.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00384 K18834 - jre:108994063 254.218