Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00375 ATGGCAGACCTATCCCTTCCATCACTACCCGTAGGTACCAGATTTGCACCAAGTGATCAACAACTCATACTCCATTATCTATACAATACGGTGATTGGAAAGCAGTTCGCCAATTGGTATGTCTCGTGCTGCAATCTTTATGGTGATATGAGTCCATCTCAAATATGGGAATTGGCTTCTGTAAAAGGGTTGATCTCTGCACAAGATGAAGCTGCAGATGCTTACTTCTTCACCAAATTAAAGAGGGTCAGCCCTACTGGGGAACGTTTCATACGCACAGCTGCGAAGGGTACATGGCATGGTGAGGATTCAGATCTTGTCCTATGCAAGTTGAAGAAAAATATTAGGCACAAAAACAAGGAGGCAGCAGTTGTTGAAGGAACATCACAGCAAGGGATGACGACAAATATGGTGGACTCATCTTCCACGTTAATGCAGGGGCCTGTCTTATCATCACAAGCATTTCTCCAGCAAGAGGAAAACAATGCTGAGGCTGATTTTATGGGAGATCTGGGAGACATCACCTTTGATGATCCGCTGAAAGGGGACATGACTTCACTTCTTGATCTTGACTTTGACAGTATATGA 588 0.4405 MADLSLPSLPVGTRFAPSDQQLILHYLYNTVIGKQFANWYVSCCNLYGDMSPSQIWELASVKGLISAQDEAADAYFFTKLKRVSPTGERFIRTAAKGTWHGEDSDLVLCKLKKNIRHKNKEAAVVEGTSQQGMTTNMVDSSSTLMQGPVLSSQAFLQQEENNAEADFMGDLGDITFDDPLKGDMTSLLDLDFDSI* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00375 195 ProSiteProfiles NAC domain profile. 9 162 IPR003441 GO:0003677|GO:0006355
Pte18g00375 195 PANTHER NAC TRANSCRIPTION FACTOR 56 9 137 - -
Pte18g00375 195 SUPERFAMILY NAC domain 5 107 IPR036093 GO:0003677|GO:0006355
Pte18g00375 195 Pfam No apical meristem (NAM) protein 10 108 IPR003441 GO:0003677|GO:0006355
Pte18g00375 195 Gene3D NAC domain 18 144 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00375 Pte-Chr18 8877999 8878714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00375 8 138 NAC Transcription Factor Family AT3G04070 31.111 7.46e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte18g00375 NAM 5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00375 - - cit:107177546 86.2705