Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00354 ATGACAATCATCAAAACCTCTTTCTCAGTGTATGTCAAGGAAATTATTCATGTTGCACCATCAAAACCAACACCAAATGTCATCCTTCCCCTGTCTACCATCGACAGTGATTACGATCACGATGTGCCCGCATACAATGTTCGAGTTTACCGAGGAAGCTTGAATCGAGAACTTAATCCAGCTGATGTGATGAGAGAAGCTCTCTCACAAGTTTTGGTGTATTACTACCCATTGGCAGGCAAGCTTAAACGCCAAGAGCATGGAAGATTCTACGTTGATTGCAACACAGTTGGAGTGCCATTTGTGGTGGCGTCAGCCAATTGTAAGCTATCCGATGTCAATTACGTTGATGGGGTAGATATTGGCTATGCAAAAGACTTGGTTTGCGATTTTCCACCAGAAGATGAGACTGGAAAGCATTCTATGGTTCTACAAGTGACAACGTTTCTATGTGGGGGTTTTACTGTAGGAATGGGCATATGGCATGCTCTCTCTGACGGAACTGGCGGCGTTCAAATGTTTTACGCACTTACTGAGCTTGCAAGCGGGATGAGTGAGCCCTCAGTGATACCTGTGTGGGAGAGGGAAAGATTGAATGGTTCAGTTTTGAAGCAATCAGTTCAGTTTCTCGTGGATCCAGCTGCTGCAGCAGTTTCACCATATTTGCCAACAGCAGATCTTGTTTTGCAGTGTTTTCATGTGGATAACAACAGTCTAAGGAATCTTAAATTCAGTTTGATGAAGGAAAGTGGGGATCCTACACTGAAGGAGAGCAGCTTCACTACTTATGAAGCCCTGGCTGCCTATTTATGGCGATCAAAATGTAAAGCTCTGAAATTGAATGATGATGGTGAAACATTGCTATGGATAGGGGTTGGAATAAGGAAAAGGATGCATCCACCGTTGCCTAAGGGTTATTATGGAAACGCATACGTATCGCATCACCATGTGATGAAAGTAAAGGATCTAGTCGGAGGACCACTTTTGAATGTTGTGAAACGGGTGAAGGAGTTAAAAAACCATGCTTGCAGCAATGAATTCATTATGAATGCAGTCAATTATTCAGAGACCATAAGACGACTAGAAATTCATCCTGAAACATATGAAGGTGCAGTTACAGATATTATAGACTGGAGGCAACTGGGAAGTTTGCAAGAAGCAGATTTTGGATGGGGAAGACCAGTAAATTTGGTTACAACGGCAAAAAACATGACGGACGATCTCAACATATGTATCATCGCACCTCCTTCTTCTCTGAATCCTTCCATTGGAGATGGAGTAAGAGTTTTTGTGATACTCCCCAATGCATGCGTGGCAACATTCAAACAGGAACTTGATGCGTTAAGTAGGGGTACGCGTGCGGTATCATTCCGGAAGCCCGTTAGAAATTTCAATAATGCCTTTGCTGTCAATTGA 1416 0.4301 MTIIKTSFSVYVKEIIHVAPSKPTPNVILPLSTIDSDYDHDVPAYNVRVYRGSLNRELNPADVMREALSQVLVYYYPLAGKLKRQEHGRFYVDCNTVGVPFVVASANCKLSDVNYVDGVDIGYAKDLVCDFPPEDETGKHSMVLQVTTFLCGGFTVGMGIWHALSDGTGGVQMFYALTELASGMSEPSVIPVWERERLNGSVLKQSVQFLVDPAAAAVSPYLPTADLVLQCFHVDNNSLRNLKFSLMKESGDPTLKESSFTTYEALAAYLWRSKCKALKLNDDGETLLWIGVGIRKRMHPPLPKGYYGNAYVSHHHVMKVKDLVGGPLLNVVKRVKELKNHACSNEFIMNAVNYSETIRRLEIHPETYEGAVTDIIDWRQLGSLQEADFGWGRPVNLVTTAKNMTDDLNICIIAPPSSLNPSIGDGVRVFVILPNACVATFKQELDALSRGTRAVSFRKPVRNFNNAFAVN* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00354 471 Pfam Transferase family 11 446 - -
Pte18g00354 471 Gene3D - 217 445 IPR023213 -
Pte18g00354 471 PANTHER ACYL TRANSFERASE 4 8 446 - -
Pte18g00354 471 Gene3D - 4 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00354 Pte-Chr18 8378653 8380797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00354 10 395 Monolignol Biosynthesis Gene Families AT5G48930 30.637 3.56e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00354 K20240 - gmx:100801843 421.779