Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00326 ATGTCCGATCTACATGATTCCTTAACGCCGTCGACGACCACCTCACCGCCCATCCACGCTCACTCCTCACGTCCGTTACCCATCCGTGAGGACTGTTGGAGCGAGGAAGCTACTTCGACACTCGTCGACGCTTGGGGTCGCCGATACGTCGAGCTCAACCGTGGGAACCTCCGTCAGAAAGACTGGCAAGATGTCGCTGACGCTGTTAACGCTTTACACGGCCACACGAAGAAGACTTATCGTACTGACGTGCAGTGTAAGAACAGAATCGATACGATAAAGAAAAAGTATAAGGTCGAGAAGGCTAGGGTTTCTTCTTCCAACAGCGTCGTTTCATCGTCTTGGCCTTTTTTTGAACGGCTTGATCAATTGATTGGATCCAATTATAGTGTGAAGAAGCCGTCTCCAACTATGACTCCTTCTCCACCGGTGGCGGTTCCCTTGCCGTATAGAAAGAAGTTGCAACCGTCGGCAGCTGCCATGGTGCTTCCACAGAAACGTTCAGTGGTGACCACGGCGGCTATGGGGATAGGGATGGATGATGCGTATTTCAGGAGGAGTTATTCGGGAATGGTGGGGGAGGAGGACGATGATGATGAAGACGAGGAAGAGGAGGAGGAGTATGGGGAGGAGCGAGAGGATGAGGAAGAAGAGGAAAGGAGAAGTGGGGTTGAGGAAGGTGAAAGAGAAAGAGAAGGGATGAGGAGGTTGGCTAAGGCAATTGAGAGTTTTGGAGAAATGTATAAGAGAATTGAAGGTGAAAAGCTAACGCAAATGATTGAGCTGGAGAAGCAAAGGATGCAATTTTCTAAGGATTTAGAGATACAAAGGATGCAGATGTTTATGGATACCCAAGTTCAGCTTGAGAGGATTAAACGTGGAAGGAGATCTGGGTCTAATGTGCCTGCCAACTTAGAGACAAGAATAATAAAAAAGGAAAGAAAAAAACACCATGGATAG 960 0.4823 MSDLHDSLTPSTTTSPPIHAHSSRPLPIREDCWSEEATSTLVDAWGRRYVELNRGNLRQKDWQDVADAVNALHGHTKKTYRTDVQCKNRIDTIKKKYKVEKARVSSSNSVVSSSWPFFERLDQLIGSNYSVKKPSPTMTPSPPVAVPLPYRKKLQPSAAAMVLPQKRSVVTTAAMGIGMDDAYFRRSYSGMVGEEDDDDEDEEEEEEYGEEREDEEEEERRSGVEEGEREREGMRRLAKAIESFGEMYKRIEGEKLTQMIELEKQRMQFSKDLEIQRMQMFMDTQVQLERIKRGRRSGSNVPANLETRIIKKERKKHHG* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00326 319 MobiDBLite consensus disorder prediction 193 221 - -
Pte18g00326 319 MobiDBLite consensus disorder prediction 1 20 - -
Pte18g00326 319 MobiDBLite consensus disorder prediction 294 319 - -
Pte18g00326 319 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 17 295 IPR044823 -
Pte18g00326 319 Pfam Myb/SANT-like DNA-binding domain 30 124 IPR044822 -
Pte18g00326 319 Coils Coil 198 221 - -
Pte18g00326 319 MobiDBLite consensus disorder prediction 1 25 - -
Pte18g00326 319 Gene3D - 33 99 - -
Pte18g00326 319 MobiDBLite consensus disorder prediction 191 233 - -
Pte18g00326 319 FunFam trihelix transcription factor ASIL2 33 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00326 Pte-Chr18 7310055 7313120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00326 29 299 Trihelix Transcription Factor Family AT3G14180 31.304 6.58e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte18g00326 Myb_DNA-bind_4 1.8e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00326 - - gmx:100785349 345.125