Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00319 ATGGGGGTAGGATGGGACCTCAATGGATTCTGCTTCAAAATTTTCTTGGGTTTGATGCTTATGGGAGTTCAGTCGCTGAATGATGATGGAGTGGCTCTGCTGGAATTCAGATCGAAAATCAACGGTGACCCTAACAACTGTTTTTCCAACTGGAACAAAAATCATAGTAATCCCTGCATCTGGCGCGGTGTTCACTGTGTCGATGGTAAAGTGCAAATGTTGGACCTAAAAGGGCTATCTTTGAAAGGGGCATTGACACCTGAGCTTGGGAAGCTTAGTCACCTACAATCTCTGTTGCTTGGAGATAACAACTTTGATAAAGCTACTTTGGTTGAGTTTGAGATGATTAGATTGCCCCTAGAATTGCAACATGGTGGGGTTCTTGCATCTGATACGATCAATGAGCCTGTCTGTGTGAATAGGAAATTTGGACACTGCTTGTGGAGCAGAGAGAGTAATCTGGGTTCACTGATAATTCCAATTAAAGAAACTCTAACGTTCTACATGAAGGCCCTGCCAATGTCACTATTTAATCTCGGAAAGAAAGCCCTTCCAGACCAGCTAGAAAATTACAATGGACGTCTTCCAAGTGAGTGTTCATCTGAGCCACATATTGTCCCAAATATACAGAATCTTTCCAGACGTCGAAGATTGCTTGAACAGTCCAAGAATCTTGAAGCTGCTGTGCCTGTGCATGGAGCGCCTGACGTAGTGACTGCTATTCCAGTAGCTCGGAGTAGTGGATCCTTCCATGCAGTGCCTGAACCCATAAAAACACCTGCAACACAGCCATCACCTGATGCATCACCTAATGATGATGACTCATTTAATAAGCAAGCAAACAAACACCCTCAAACTAAATCTGCTCCTGCACATTGGTGGATATACATAGTTATACCAATTGCTGTCATCGTTGTCGTTGGTGCTGCAATCATGGTTTGGAAGCAGCAAAAACACGTTGTGGAGACCATTCGTCCTTGGAAGACTGGAATAAGTGGACAGTTGCAAAAAGCCTTTGTGACAGGAGCTCCCAAATTGAATAGAGCGGAACTGGAAACTGCTTGTGAAGACTTCAGCAATATCATTGATACAGTTGACGGTTGCATGATATATAAGGGAACTCTGTCAAGTGGAGTTGAGATTGCAGTTTCTTCGACTCCTATAACTGATGCCAAGAATTGGACCAAGAAGTCAGAGATGACCTACAGGAAAAAGATTGAGACATTGTCAAGGGTGAACCACAAGAACTTCGTGAATATGCTAGGCTATAGTGAAGAGGAAGAGCCATTTACTAGGATGATAGTGTTTGAATATGCTCCAAATGGAACCCTATTCGAACATCTGCATGTTAAGGAAGTTGAACATCTTGATTGGACTTCAAGGATGAGAATCATTATGGGGACTGCATATTGTCTACAATACATGCACCATGATTTGAATCCACCTGTTGCGCATCGTAATCTCACTTCTAGTGCTATCTTCCTCACAGATGATTTTGCTGCTAAAGTTGCAGAGATCAGTTTTGGTAATACGGCGGGATCACCTACTCCATCACCTTCTGTATCTGGCCCAATGGAATCTATACCTTCTGATCAGTTGCCAACCTCTGTGGATCCTCAGTCAAATGTCTACAGCTTTGGAACTTTGTTGCTCGAAATAATTTCCGGCAAGCTACTGTACTCAGAGGAGCAAGGCAACCTTGTCACTTGGGCTGATCAGTACTTGAACAACAAGCGAAGCATCAGCTACATGATCGATCCAACCCTGAATTCTTTCAAAGATAATGAGCTTGGTATCATCTGTGAGGTAATCCAAGACTGCATCCAATCTGATCCTAAGCTAAGACCAACAATGAAAGACGTCACAAGCAAACTAAGGGAAGTGCTTGGCATCACGCCTGAGCAAGCAACTCCAAGGCTCTCTCCCCTTTGGTGGGCTGAACTTGAGATCTTGTCCGTTGAGGCAACATGA 1971 0.4368 MGVGWDLNGFCFKIFLGLMLMGVQSLNDDGVALLEFRSKINGDPNNCFSNWNKNHSNPCIWRGVHCVDGKVQMLDLKGLSLKGALTPELGKLSHLQSLLLGDNNFDKATLVEFEMIRLPLELQHGGVLASDTINEPVCVNRKFGHCLWSRESNLGSLIIPIKETLTFYMKALPMSLFNLGKKALPDQLENYNGRLPSECSSEPHIVPNIQNLSRRRRLLEQSKNLEAAVPVHGAPDVVTAIPVARSSGSFHAVPEPIKTPATQPSPDASPNDDDSFNKQANKHPQTKSAPAHWWIYIVIPIAVIVVVGAAIMVWKQQKHVVETIRPWKTGISGQLQKAFVTGAPKLNRAELETACEDFSNIIDTVDGCMIYKGTLSSGVEIAVSSTPITDAKNWTKKSEMTYRKKIETLSRVNHKNFVNMLGYSEEEEPFTRMIVFEYAPNGTLFEHLHVKEVEHLDWTSRMRIIMGTAYCLQYMHHDLNPPVAHRNLTSSAIFLTDDFAAKVAEISFGNTAGSPTPSPSVSGPMESIPSDQLPTSVDPQSNVYSFGTLLLEIISGKLLYSEEQGNLVTWADQYLNNKRSISYMIDPTLNSFKDNELGIICEVIQDCIQSDPKLRPTMKDVTSKLREVLGITPEQATPRLSPLWWAELEILSVEAT* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00319 656 Pfam Protein tyrosine and serine/threonine kinase 378 625 IPR001245 GO:0004672|GO:0006468
Pte18g00319 656 ProSiteProfiles Protein kinase domain profile. 321 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00319 656 MobiDBLite consensus disorder prediction 251 285 - -
Pte18g00319 656 SUPERFAMILY L domain-like 27 107 - -
Pte18g00319 656 Gene3D Ribonuclease Inhibitor 29 122 IPR032675 -
Pte18g00319 656 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Pte18g00319 656 PANTHER PROTEIN MALE DISCOVERER 2 18 654 - -
Pte18g00319 656 MobiDBLite consensus disorder prediction 510 536 - -
Pte18g00319 656 Gene3D Phosphorylase Kinase; domain 1 327 438 - -
Pte18g00319 656 Gene3D Transferase(Phosphotransferase) domain 1 439 636 - -
Pte18g00319 656 FunFam Inactive receptor-like serine/threonine-protein kinase 330 438 - -
Pte18g00319 656 SUPERFAMILY Protein kinase-like (PK-like) 358 625 IPR011009 -
Pte18g00319 656 MobiDBLite consensus disorder prediction 262 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00319 Pte-Chr18 7062717 7067664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00319 14 630 Receptor kinase-like Gene Family AT2G42290 26.145 1.95e-39 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pte18g00319 PK_Tyr_Ser-Thr 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00319 - - qsa:O6P43_012777 714.916