Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00318 ATGGCCAACGCTAACCCAAGCCGCTCTCGTTGTAACTTCGAGGAGTGGATGAACCTTCAAGCTCAAGACCTCGAAGAACTGAGCCAAGTCCTTGAGCAGCACTCCCAAAATGATCAACGTTTGACACAGGTTGCACAAAACGCTATCACGCACTTCGAAGATTACATTCATAGACGATCCCGACTTGCTCCAAATGAAGTCTCGACATTTCTTGCTCCTATTTGGTGTGCCACCATAGAACTTCCGTTGCTTTGGCTAGGGGGTTGTAGACCCTCTTCTTTTATGAGGCTTATATATGCAGAGAGTGGTTTAGAACTCGAGGCCAGCCTGCAGAAATTCCTCGACGGGACCATCACAAACAGCGACGACCTTGGAGGGATCTCTGCTAGGCAACTTCTACTCATCGACAATTTACGAAGGAAAACAATTCAAGAAGAAGAAAAGTTGTCCACCCAGTTAGCAAATTTGCAGGAAGACGCAGCTGACCAGCCTTTGGCTACGATTGCACACCGTTTAAGCCAGATTGGAATGATGACTGATGAGGCGAAAACGGCACTGGACCAGCATGAGGTGCTTTTGCTTGCTCTACTGAAAGAAGCTGATCAGTTGAGGCTGACCACACTCAAGGAGCTGATTGCAATACTGACGCCATTGCAGACAGTCAAGTATCTAGCTGCAAGTAAGAAATTTCATCTAACTTTGCATGAGTGGGGTAAGCAAAGGGCTCAAAGTCAAATGGCGCATAGCGAATAG 753 0.4714 MANANPSRSRCNFEEWMNLQAQDLEELSQVLEQHSQNDQRLTQVAQNAITHFEDYIHRRSRLAPNEVSTFLAPIWCATIELPLLWLGGCRPSSFMRLIYAESGLELEASLQKFLDGTITNSDDLGGISARQLLLIDNLRRKTIQEEEKLSTQLANLQEDAADQPLATIAHRLSQIGMMTDEAKTALDQHEVLLLALLKEADQLRLTTLKELIAILTPLQTVKYLAASKKFHLTLHEWGKQRAQSQMAHSE* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00318 250 Coils Coil 17 44 - -
Pte18g00318 250 ProSiteProfiles DOG1 domain profile. 6 244 IPR025422 GO:0006351|GO:0043565
Pte18g00318 250 Pfam Seed dormancy control 24 99 IPR025422 GO:0006351|GO:0043565
Pte18g00318 250 Coils Coil 139 159 - -
Pte18g00318 250 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 10 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00318 Pte-Chr18 7005529 7006856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00318 16 226 bZIP Transcription Factor Family AT5G06950 25.909 1.15e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00318 - - cill:122278821 250.751