Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00317 ATGGCAGAAAACGCTGTCACTTTGAACAGCGACAATATCAACAACGAGAACTCATCGTTGCTTTTGGGGCGTTTCGAGGTTGGGAAGCTCCTTGGCCATGGTACTTTTGCAAAGGTTTACCATGCCCGCAACATCAAAACTGGTGACGGTGTTGCCATCAAGGTTATCGACAAAGAGAAAATCCTAAAGAGTGGTCTAATCGCTCACATCAAGCGCGAGATCTCTATCCTACGCCGTGTACGCCACCCCAACATCGTTCGATTGTTTGAAGTCATGGCTACCAAGTCAAAGATCTACTTTGTTATGGAGTATGTACGTGGTGGTGAGCTGTTCAACAAGGTCGCCAAAGGTAGATTGAAAGAAGAAGTTGCTAGGAAATACTTCCAGCAGTTGGTTTCTGCTGTTGGATTCTGTCATGCTAGAGGGGTATATCACAGGGATCTAAAGCCTGAAAACTTGTTACTTGACGAGAATGGTGACTTAAAAGTGTCTGATTTTGGTCTCAGTGCTGTGTCAGACCAAAATAGACAAGATGGATTGTTTCACACTTTTTGCGGAACTCCAGCTTATGTTGCCCCTGAGGTATTGTCGAGGAAAGGGTATGACGCTGCAAAGGTTGATATTTGGTCTTGTGGGGTTGTCTTGTTTGTTTTGATGGCTGGTTATTTACCTTTCCATGATCAAAATATTATGGCGATGTACAAGAAGATTTACAAGGGTGAATTTAGATGTCCTAGATGGTTTTCACCTCAGCTAAATAAGCTTCTTACAAGGCTTCTATATACAAACCCTGAATCCCGGATTACAATTCCTGAGATTATGGAGACAAAGTGGTTTAAGAAAGGCTTCAAACAAATCAACTTTTATGTAGAGGATGACAAACTGTGCAATGTTCAGGAAAATGAAATTAACGATGGGGATGAAGCAGAGTCATTGTCTGCAAACCAATCCATCTGCGAACCGGATTCTGAGATAGAAAGTAGGAGGAGAGTTTCTAGTCTTCCTAGACCTGCAAGTTTGAATGCATTCGATATAATATCGTTTTCACGAGGTTTCGATCTTTCGGGGTTGTTTGAGGAAGGTGGGGATGAGGCGAGGTTTGTTACCTGTGCGCCTGTATTGAAGATAATATCAAAATTGGAGGAAATAGCTAAAGTTGTGAGCTTTAATGTGAGGAAGAAAGATTGTAGAGTGAGCTTGGAGGGGTCAAGAAAGGGTGTAAAGGGGCCATTGACGATTGCTGCAGAGATATTTGAATTAACACCGTCTTTAGTGGTGGTGGAGGTTAAGAAGAAGGGTGGAGATAAAGCAGAATACGAACAGTTCTGCAATGAAGAGCTCAAGCCTGGCTTGCACAAATTGATGATGGAGGAAGCTGCTACTTCGCATCTACCTTCAGAGGCTCAATACAGGGAATGA 1419 0.4285 MAENAVTLNSDNINNENSSLLLGRFEVGKLLGHGTFAKVYHARNIKTGDGVAIKVIDKEKILKSGLIAHIKREISILRRVRHPNIVRLFEVMATKSKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLVSAVGFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQNRQDGLFHTFCGTPAYVAPEVLSRKGYDAAKVDIWSCGVVLFVLMAGYLPFHDQNIMAMYKKIYKGEFRCPRWFSPQLNKLLTRLLYTNPESRITIPEIMETKWFKKGFKQINFYVEDDKLCNVQENEINDGDEAESLSANQSICEPDSEIESRRRVSSLPRPASLNAFDIISFSRGFDLSGLFEEGGDEARFVTCAPVLKIISKLEEIAKVVSFNVRKKDCRVSLEGSRKGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKAEYEQFCNEELKPGLHKLMMEEAATSHLPSEAQYRE* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00317 472 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00317 472 FunFam Non-specific serine/threonine protein kinase 337 455 - -
Pte18g00317 472 FunFam Non-specific serine/threonine protein kinase 15 315 - -
Pte18g00317 472 Gene3D Transferase(Phosphotransferase) domain 1 15 332 - -
Pte18g00317 472 ProSiteProfiles NAF domain profile. 335 359 IPR018451 GO:0007165
Pte18g00317 472 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Pte18g00317 472 SUPERFAMILY Protein kinase-like (PK-like) 21 293 IPR011009 -
Pte18g00317 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Pte18g00317 472 FunFam Non-specific serine/threonine protein kinase 16 104 - -
Pte18g00317 472 Pfam NAF domain 337 393 IPR004041 GO:0007165
Pte18g00317 472 Gene3D Kinase associated domain 1, KA1 335 456 - -
Pte18g00317 472 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00317 472 CDD CIPK_C 341 451 - -
Pte18g00317 472 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 446 - -
Pte18g00317 472 CDD STKc_SnRK3 24 278 - -
Pte18g00317 472 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00317 Pte-Chr18 6982416 6985174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00317 19 458 CBL-interacting serine-threonine protein kinases AT4G18700 80.813 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte18g00317 Pkinase 8e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00317 - - qsa:O6P43_031947 768.844