Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00315 ATGAGAGGGAGAAAAATGAAGCTTTTGTGTGATTTGTTGATTCTGTTAGCTTTTGTTGCATCAGTGGAATCTACGTGCAATACTGCAGACCAAGATATGGTGTCTAAGGCTTTCAAATCAGTGAAAGGATTCAATACGTCATGGTTTCAAGTTGTGGATTTGAACTGTTCAGATTCTCAAATAAGAGAAATAAAGCTGCCTTCAAGGAATCTAAGTGGGACTATTTCATGGAAGTTCCTCGGGAATATGTCACACTTGCAGGTCCTTAATCTTTCTGGGAATTCATTAAAAGGGTTTGTGCCAAATTGGTTTTGGAGTACCCCAAATTTGAAGGTAGTTGATTTGTCAAATAACAGGTTTGGTGGAAGCATTGGCTTTGAGCCCAACTCAGGATATGCCTCAGTTGAAGTTCTGAATCTTTCACACAACAGGGTCACAAACTTGGTTAGGCTCTCTGGTTTCCAAAAGCTCAAAACTTTGGATCTTTCACACAATGATCTGGGTGTTCTGCCATCTGGGTTTTCTAACCTCACCAATCTACATAACCTTGTACTTTCTAGCTGTAGAATCTTAGGAAATGTGAAACCCATCTCTGTTCTACAAGCACTGGATCACCTAGACTTGTCTAATAATTCCATGAATGGTACTTTCCCTTCTGATTTTCCACCTCTCAGTACTATGAAGTTCTTGAATGTTTCTCTCAATAATTTTACAGGATGGATTGGCTCCAATGTATACTACCAGAAATTTGGGAAATTAGCTTTCATCCATGCCGGAAATAATTCTGCTTTCATTGCATCAAAAACTCCAAGTTTACATGCACCCATACAGCATCGTCATACACCCCCACCTAATTACATATCACAACAAACACATAAACACACATACAAACATCCTGTCAGCCATTTTCACCACAAACCCTTATCAAAGTCCAAACATTTTGCTGTGATTCTGTCATGTGCAGTAGTTTTTGTGTTTGTTTCCACAACCATCTGTGTCCTCTGCATTTTCAGAAAGAAACAATTGGCCAAAAAGACCAAATGGGCAATCTCTAAGCCAATCCAACTCCCAATCAAGATCGAGAAATCTGGTCCATTCTCATTTGAAACTGAGTCAGGCAAATCATGGGTTGCTGACATCAGAGAACCTACATATGCCCCAGTGGTGATGTTTGAGAAGCCATTGCTGAACCTTACCTTCAAGGACCTGATTGCAGCCACATCTCACTTTGGGAAAGACTCGCAGCTTGCTGAAGGTCGGTGTGGTCCGGTCTACCGTGGAGTCTTACCAGGTGAACTCCACGTGGCAATCAAGGTCTTAGAAAGCGCCAGAGACGTTGATCATAGTCATGCAGTCAACATCTTTGACGGCCTCTCTAAGCTCAAACACCCCAACTTGTTACCCCTCTCTGGTTACTGCATTGCAGGCAAGGAGAAACTGATATTATACGAGTTTATGTTCAATGGCGACTTGCAAAGGTGGTTGCACGAATTGCCCACCGGGGAACCAAACGTGGAAGACTGGGCTGGTGACACGTGGGAGATTCAAAATGGAACTGGGTTTCAAAATTCATCACCGGAGAAGATGAGTTGGCTCAGGCGCCACCGCATTGCTGTTGGGATAGCTCGTGGGCTAGCTTACCTCCACCATGCCAGTTCTAGACCGGTGGTGCATGGCCACCTAGTGACTTCGAATGTATTACTTACAGATGAGTTGGAGCCGCGGATCGCCGACTTTGGCTTCCGAGCAATTGGCAAATGTGACGACGGTGAGGCGGCAAAATGTAGTACCGAGATGGATGTGTATTGTTTCGGGGTGGTGTTGATCGAGTTACTGACTGGAAAGGCCGGCACTGCTGAAACCGTGGTGTGGGTGAGGAAATGGGTGAGAGAAGGAAAGGGTGTGAATGCATTGGATGAGAGGATGAGACTCGGCGGTGATTCGGAGAGAGAGATGGTGGAGAGCCTCCGAGTTGCTTACTTGTGTACGGCCGAGTCACCTGAAAAGAGGCCCACAATGAAACAAGTGGTGGGTTTGTTAAAAGACATACATCCCCCGGTGGACTCGACCTGA 2073 0.4481 MRGRKMKLLCDLLILLAFVASVESTCNTADQDMVSKAFKSVKGFNTSWFQVVDLNCSDSQIREIKLPSRNLSGTISWKFLGNMSHLQVLNLSGNSLKGFVPNWFWSTPNLKVVDLSNNRFGGSIGFEPNSGYASVEVLNLSHNRVTNLVRLSGFQKLKTLDLSHNDLGVLPSGFSNLTNLHNLVLSSCRILGNVKPISVLQALDHLDLSNNSMNGTFPSDFPPLSTMKFLNVSLNNFTGWIGSNVYYQKFGKLAFIHAGNNSAFIASKTPSLHAPIQHRHTPPPNYISQQTHKHTYKHPVSHFHHKPLSKSKHFAVILSCAVVFVFVSTTICVLCIFRKKQLAKKTKWAISKPIQLPIKIEKSGPFSFETESGKSWVADIREPTYAPVVMFEKPLLNLTFKDLIAATSHFGKDSQLAEGRCGPVYRGVLPGELHVAIKVLESARDVDHSHAVNIFDGLSKLKHPNLLPLSGYCIAGKEKLILYEFMFNGDLQRWLHELPTGEPNVEDWAGDTWEIQNGTGFQNSSPEKMSWLRRHRIAVGIARGLAYLHHASSRPVVHGHLVTSNVLLTDELEPRIADFGFRAIGKCDDGEAAKCSTEMDVYCFGVVLIELLTGKAGTAETVVWVRKWVREGKGVNALDERMRLGGDSEREMVESLRVAYLCTAESPEKRPTMKQVVGLLKDIHPPVDST* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00315 690 ProSiteProfiles Protein kinase domain profile. 410 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00315 690 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Pte18g00315 690 Pfam Protein tyrosine and serine/threonine kinase 413 678 IPR001245 GO:0004672|GO:0006468
Pte18g00315 690 Gene3D Phosphorylase Kinase; domain 1 370 485 - -
Pte18g00315 690 Gene3D Ribonuclease Inhibitor 14 129 IPR032675 -
Pte18g00315 690 Gene3D Transferase(Phosphotransferase) domain 1 486 589 - -
Pte18g00315 690 SUPERFAMILY L domain-like 48 260 - -
Pte18g00315 690 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 57 683 - -
Pte18g00315 690 Pfam Leucine rich repeat 69 120 IPR001611 GO:0005515
Pte18g00315 690 SUPERFAMILY Protein kinase-like (PK-like) 387 680 IPR011009 -
Pte18g00315 690 Pfam Leucine Rich repeats (2 copies) 135 171 IPR025875 -
Pte18g00315 690 SMART LRR_typ_2 83 106 IPR003591 -
Pte18g00315 690 SMART LRR_typ_2 154 176 IPR003591 -
Pte18g00315 690 Gene3D Transferase(Phosphotransferase) domain 1 590 686 - -
Pte18g00315 690 FunFam Putative LRR receptor-like serine/threonine-protein kinase 371 485 - -
Pte18g00315 690 Gene3D Ribonuclease Inhibitor 130 273 IPR032675 -
Pte18g00315 690 FunFam Calmodulin-binding receptor kinase CaMRLK 133 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00315 Pte-Chr18 6902505 6905476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00315 43 683 Receptor kinase-like Gene Family AT5G07280 30.213 1.09e-70 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Pte18g00315 PK_Tyr_Ser-Thr 4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00315 - - qsa:O6P43_012781 947.192