Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00309 ATGGCGGATGTTTCGAGAGTACTATTAATACTAACTATAGTTGCTTCCTTTCTCCCAAGCTATGTAATGAGCAGAGTGTCAGCAAGCTACACTTCAGTGTACAGCTTCGGAGATTCATGGGCTGACACGGGAAATACATATTATGTATTCAAGTCTCGAAACACATCAACTAGTTGCATGAAGCTTCCATATGGAGAGGACTTCTTTGGAAACTCCACTGGGAGATGTTCTAATGGCCGGTTGGTCATTGACTTCATTGCTGAGCATCTAGGGCTGCCGTACGTGAAACCATATTTTGGCATCGTGGGGGCAAATGTGACTGACGCAAGCATTCAGGACGGTATAAATTTTGCCATTTCAGGAGCAACTGCATTGGACCCAAGTTTCTTTGTTAAGAGGAGAATTCCTTTTCCCAAAGGATATTGTCTGAGAGATCAGTTAGATTGGTTCAACAATTTGCTTCCATCTCTTTGTGCTTCACTCTCAAGCTGCAGGAACATTTTCAAAAGCTCTTTATTCTTGATGGGTGAGATCGGAGGGAATGATTACTTGTTCGCTATTGGTGCAAGAAAAGGAAAAGAAGCGCTTACATCCATGATACCTAAAGTTATTAATGCAACCATTTCAGCTGTCAACGAGTTGATAAATCTTGGAGCAATGACATTGTTGGTTCCTGGCACTATTCCAATTGGGTGTAATTCAATTACCTTGACAATTTATGAGGGCACACCAATCGAAGAATATGATCAATTTGGTTGTCTTAAGTGGATGAACGAGTTGGCCAAAGACCACAACGAGCAGCTTCAAATTGAATTACATAACCTTCAAATGCTTTATCCTGATGTTGATATCTTCTATGGTGACTATTACAATATTTTGTCGAAGCTTATTCAATCTCCAACCAAATTTGGGTTTGCGGATGGATTGGTTCCTTTAAAATGCTGTTGTGGAGGAGGAGGGCTGTATGAGTACAATATGTCAGTACAATGTGGTGACAGACGAGCAAAAGTTTGTGATGATCCTTCAAGATATGTCTACTGGGATGGTGCTCATCTAACTGAAGCTGCCTATAAATGGATTGCTAAAAGCTTATTCTCAAAGGAACCATTTGCTACAATTCTGGAAATTCGTGATACAACATACCTTTCTACATAA 1155 0.4035 MADVSRVLLILTIVASFLPSYVMSRVSASYTSVYSFGDSWADTGNTYYVFKSRNTSTSCMKLPYGEDFFGNSTGRCSNGRLVIDFIAEHLGLPYVKPYFGIVGANVTDASIQDGINFAISGATALDPSFFVKRRIPFPKGYCLRDQLDWFNNLLPSLCASLSSCRNIFKSSLFLMGEIGGNDYLFAIGARKGKEALTSMIPKVINATISAVNELINLGAMTLLVPGTIPIGCNSITLTIYEGTPIEEYDQFGCLKWMNELAKDHNEQLQIELHNLQMLYPDVDIFYGDYYNILSKLIQSPTKFGFADGLVPLKCCCGGGGLYEYNMSVQCGDRRAKVCDDPSRYVYWDGAHLTEAAYKWIAKSLFSKEPFATILEIRDTTYLST* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00309 384 Coils Coil 258 278 - -
Pte18g00309 384 CDD SGNH_plant_lipase_like 31 367 IPR035669 -
Pte18g00309 384 Gene3D SGNH hydrolase 21 368 IPR036514 -
Pte18g00309 384 SUPERFAMILY SGNH hydrolase 32 364 - -
Pte18g00309 384 Pfam GDSL-like Lipase/Acylhydrolase 33 363 IPR001087 GO:0016788
Pte18g00309 384 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 16 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00309 Pte-Chr18 6425455 6427648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00309 5 364 Pollen Coat Proteome AT1G75910 26.757 4.08e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00309 - - qsa:O6P43_012744 370.548