Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00306 ATGGGTGAAATCGGAGGGAATGATTACAATTTCGCTATTGCTGGAAATGTAACAAGAGCAGAGCTCAAAGCCTACGTACCAGAAGTCATCAATTCAATCACTTCAGGCATTCAGGAATTGATTAATCTTGGAGCAATGACACTATTGATCCCTGGAAATCAACCAATCGGGTGCAATGCATATTTGTTAACAATTTACCAGGCCATGGATGATGAAGAATATGATCAATTTGGTTGTCTCAAGTGGTTAAACAAATTTGGTGAGTACCACAACAAGCAGCTTCAAATTGAACTGAACAAACTCCGAAGACTTTATCATCATGCCAACATCATCTATGGGGATTATTACAATCCTCTATTGAGGATGTTTCATGCTCCAACTCAATATGGGTTTGAAGAAGGATTGATTCCTTGTTGCGGAGGTGGAGGGCCATACAACTGTAATGTATCGGTACAATGTGGGTACGAAGGAGCAAACGCTTGTGATGATCCTTCACGATATGTCAACTGGGATGGTATCCATCTAACTGAAGCTGCTTATGAGTGGGTGACTAAAAGTTTATTGTCACAAGAACCGTTTTCTACAATTGATCACATCTCATACCACATGCCTTTCTAG 618 0.4029 MGEIGGNDYNFAIAGNVTRAELKAYVPEVINSITSGIQELINLGAMTLLIPGNQPIGCNAYLLTIYQAMDDEEYDQFGCLKWLNKFGEYHNKQLQIELNKLRRLYHHANIIYGDYYNPLLRMFHAPTQYGFEEGLIPCCGGGGPYNCNVSVQCGYEGANACDDPSRYVNWDGIHLTEAAYEWVTKSLLSQEPFSTIDHISYHMPF* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00306 205 Pfam GDSL-like Lipase/Acylhydrolase 3 185 IPR001087 GO:0016788
Pte18g00306 205 SUPERFAMILY SGNH hydrolase 3 188 - -
Pte18g00306 205 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 1 194 - -
Pte18g00306 205 Gene3D SGNH hydrolase 1 192 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00306 Pte-Chr18 6121779 6122780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00306 5 190 Pollen Coat Proteome AT1G75930 26.289 2.00e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00306 - - qsa:O6P43_012745 245.743