Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00303 ATGACAATCATCAAAACCTCTTTCTCAGTATATTTCAAGGAAGTTATCCATGTTGCACCATCAAAACCAACACCAAATGTCATCCTTCCGCTGTCTACCATCGACAGTGATTACGATCATGACGTGCCCGCTTACATTGTTCGAGTTTATAGAGGAAGATTGGATTGTGACCTTAATCCAGCTGATGTGATGAGAGAAGCTCTCTCTAAAGCTTTGGTGTATTACTACCCATTGGCAGGCAAGCTTAAACGCCAAGAGCATGGAAGACTCTACGCTAATTGCAACGCAGCCGGGGTGCCATTTGCGGTGGCATCAGCCAATTGTAGGCTATCCGATGTCAATTACATTGATGGGGTAGATATTAGATATGCAAAAGACTTGGTTTACGATTTCCCACCAGAAGATGAGACTGGAAAGCATTCAATGGTTCTGCAAGTCACAACGTTTCTATGTGGAGGTTTTACAATTGGATTCGGCACATCGCATGCTATCTGCGATGGAACTGGCGGGGTTCAAATATTAAACGCACTTACTGAGCTTGCAAGCGGGATGAGTGAGCCCTCAGTGATACCTGTGTGGGAGAGGGAAAGATTGAATGGTTCAGTTTTCAAGCAACCAGTTAATCTTCCAGTGGATCCAGCTACTGCAGCAGTTTCACCGTATTTGCCAACTACAGATCTCGTGTTGCAGTGTTTTCATGTGGATAACAACAGTCTGAGGAATCTTAAATTCAGTTTGATGAAGGAAAATGGGGATCCTACACTGAGGGACAGCAGCTTTACAACTTATGAAGTCCTGGCTGCCTATTTATGGCGATCAAAATGTAAAGCTTTGAAATTGAATGATGAAGGTGAAACATTGCTATGGATAGGGGTTGGAATAAGGAAAAGGATGCATCCTCCATTGCCTGTGGGCTATTATGGAAACGCATACGTATCGCATCACCATGTAATGAAAGTAAAGGATCTAGTAGCAGGACCACTTTTGAATGTTGTGAAGCAAGTAAAGGAGTTAAAAAACCATGCTTGCAGTGATATTGAATTCATGAGGAACGCACTCAATTATTCAGAAACAATAAGACGACTAGAAATTATTAATACTGAAACATATCAAGGTGGAGTTACAGATATTGTAGACTGGAGGCAATTTGGAGCTATGGAAGATGTGGATTTTGGATGGGGAAGAGCAGTAAATTGGGTTACAACTGCAAAAGACATGCTGGACGATCTCAACATATGTATCATTGCGCCTCCTTCTTCTCTACATCCTTCCATTAGAGATGGAGTTAGAGTTTTTGTCATTCTCCCCAGTGCATGCATCACAACATTCAAACAGGAACTTGATGCCTTGAAAGACAGTCATGCAATGAAGGGTAGTAAAAATTTTCAAATCAAATCCAAATTTTAA 1407 0.4158 MTIIKTSFSVYFKEVIHVAPSKPTPNVILPLSTIDSDYDHDVPAYIVRVYRGRLDCDLNPADVMREALSKALVYYYPLAGKLKRQEHGRLYANCNAAGVPFAVASANCRLSDVNYIDGVDIRYAKDLVYDFPPEDETGKHSMVLQVTTFLCGGFTIGFGTSHAICDGTGGVQILNALTELASGMSEPSVIPVWERERLNGSVFKQPVNLPVDPATAAVSPYLPTTDLVLQCFHVDNNSLRNLKFSLMKENGDPTLRDSSFTTYEVLAAYLWRSKCKALKLNDEGETLLWIGVGIRKRMHPPLPVGYYGNAYVSHHHVMKVKDLVAGPLLNVVKQVKELKNHACSDIEFMRNALNYSETIRRLEIINTETYQGGVTDIVDWRQFGAMEDVDFGWGRAVNWVTTAKDMLDDLNICIIAPPSSLHPSIRDGVRVFVILPSACITTFKQELDALKDSHAMKGSKNFQIKSKF* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00303 468 PANTHER ACYL TRANSFERASE 4 8 448 - -
Pte18g00303 468 Pfam Transferase family 10 448 - -
Pte18g00303 468 Gene3D - 4 207 IPR023213 -
Pte18g00303 468 Gene3D - 216 447 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00303 Pte-Chr18 5858197 5859603 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00303 47 397 Monolignol Biosynthesis Gene Families AT5G48930 32.507 2.15e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00303 K20240 - gmx:100801843 422.935