Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00300 ATGACAATCATCAAAACCTCTTTCTCAGTATATTTCAAGGAAGTTATCCATGTTGCACCATCAAAACCAACACCAAATGTCATCCTTCCGCTGTCTACCATCGACAGTGATTACGATCATGACGTGCCCGCTTACATTGTTCGAGTTTATAAAGGAAGATTGGATTGTGACCTTAATCCAGCTGATGTGATGAGAGAAGCTCTCTCTAAAGCTTTGGTGTATTACTACCCATTGGCAGGCAAGCTTAAACGCCAAGAGCATGGAAGACTCTACGCTAATTGCAACGCAGCCGGGGTGCCATTTGCGGTGGCATCAGCCAATTGTAGGCTATCCGATGTCAATTACATTGATGGGGTAGATATTAGATATGCAAAAGACTTGGTTTACGATTTCCCACCAGAAGATGAGACTGGAAAGCATTCAATGGTTCTGCAAGTCACAACGTTTCTATGTGGAGGTTTTACAATTGGATTCGGCACATCGCATGCTATCTGCGATGGACCTGGCGGGGTTCAAATATTAAACGCACTTACTGAGCTTGCAAGCGGGATGAGTGAGCCCTCAGTGATACCTGTGTGGGAGAGGGAAAGATTGAATGGTTCAGTTTTCAAGCAACCAGTTAATCTTCCAGTGGATCTAGCTACTGCAGCAGTTTCACCGTATTTGCCAACTACAGATCTCGTGTTGCAGTGTTTTCATGTGGATAACAACAGTCTGAGGAATCTTAAATTCAGTTTGATGAAGGAAAATGGGGATCCTACACTGAGGGACAGCAGCTTTACAACTTATGAAGTCCTGGCTGCCTATTTATGGCGATCAAAATGTAAAGCTTTGAAATTGAATGATGAAGGTGAAACATTGCTATGGATAGGGGTTGGAATAAGGAAAAGGATGCATCCTCCATTGCCTGTGGGCTATTATGGAAACGCATACGTATCGCATCACCATGTAATGAAAGTAAAGGATCTATTAGCAGGACCACTTTTGAATGTTGTGAAGCAAGTAAAGGAGATAAAAAACCATGCTTGCAGTGATATTGAATTCATGAGGAACGCACTCAATTATTCAGAAACAATAAGACGACTAGAAATTAATACTGAAACATATCAAGGTGGAGTTACAGATATTGTAGACTGGAGGCAATTTGGAGCTATGGAAGATGTGGATTTTGGATGGGGAAGAGCAGTAAATTGGGTTACAACTGCAAAAGACATGCTGGACGATCTCAACATATGTATCATTGCGCCTCCTTCTTCTCTACATCCTTCCATTAGAGATGGAGTTAGAGTTTTTGTCATTCTCCCCAGTGCATGCATCACAACATTCAAACAGGAACTTGATGCCTTGAAAGACAGTCATGCAATGAAGGGTAGTAAAAATTTTCAAATCAAATCCAAATTTTAA 1404 0.4152 MTIIKTSFSVYFKEVIHVAPSKPTPNVILPLSTIDSDYDHDVPAYIVRVYKGRLDCDLNPADVMREALSKALVYYYPLAGKLKRQEHGRLYANCNAAGVPFAVASANCRLSDVNYIDGVDIRYAKDLVYDFPPEDETGKHSMVLQVTTFLCGGFTIGFGTSHAICDGPGGVQILNALTELASGMSEPSVIPVWERERLNGSVFKQPVNLPVDLATAAVSPYLPTTDLVLQCFHVDNNSLRNLKFSLMKENGDPTLRDSSFTTYEVLAAYLWRSKCKALKLNDEGETLLWIGVGIRKRMHPPLPVGYYGNAYVSHHHVMKVKDLLAGPLLNVVKQVKEIKNHACSDIEFMRNALNYSETIRRLEINTETYQGGVTDIVDWRQFGAMEDVDFGWGRAVNWVTTAKDMLDDLNICIIAPPSSLHPSIRDGVRVFVILPSACITTFKQELDALKDSHAMKGSKNFQIKSKF* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00300 467 Gene3D - 217 446 IPR023213 -
Pte18g00300 467 Gene3D - 4 207 IPR023213 -
Pte18g00300 467 PANTHER ACYL TRANSFERASE 4 8 447 - -
Pte18g00300 467 Pfam Transferase family 10 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00300 Pte-Chr18 5824829 5826232 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00300 63 396 Monolignol Biosynthesis Gene Families AT5G48930 33.429 1.04e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00300 K20240 - gmx:100801843 425.631