Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte18g00292 | ATGGATAGAAGTACTCAAGTGGTTCTACTAGTTCTTTTCTTCAAGTTTCTGGCCGTTGCAGCACAGACCACAGATCCTCAAGACTTTGGTGCTTTAAGGGGTCTAATTGATAATTGGCAAAACACACCACCAAATTGGGTGGGAACAGATCCTTGTGGAACTGGTTGGGCAGGAATCAGCTGCACCAATTCAAGGGTGACGTCCATAACACTGCCAAACATGGACTTGGAGGGCAAAATAACAGCAGATATCCTGAAAATAACTGAATTACTAACTCTTGATCTTTCTAACAATCAAGGCCTAGGAGGAACAATTCCACAAGGAATAGGAAGTTTGAAGAAGCTAACCACCTTAATTCTGGTCGGTTGCAATTTCGTCGGCCCCATTCCAGATTCAATTGGATCTTTGAAACAGATGACATTTCTAGCACTTAACTCCAACAAATTCAGTGGACCGATACCTCCAAGTATTGGCAATCTATTAAATCTTACATGGCTAGATCTTTCTGATAATGAACTTGAGGGGCCAATCCCAGTTTCTGATGAAAACTCACCTGGTGTAGATATGCTGGTGAAGACTCTTCATTTGCTCCTGAATAACAACCAGCTAAATGGATCCATTCCCTTGTCTCTAGGAACAGTGAAATCCTTGCAAGTGGTGCGTTTGGATGGGAACCAATTGAGTGGAGTAGTGCCTTTAAGTATCAGCGAACTTGCAAACCTCAATGAACTTCATTTATCAAACAACAAGCTCAATGGATCTCTGCCTGACCTAAGTGGCATGAATCAGCTCAACTATGTAATAATGCAGAACACGGGACTCCAAGGGGAAATTCCTGTTTCCATATTCAATCTCACAAATTTAGAGTCTGTACTGTTTGGGAATCCAATATGTTTGGAAACAGGAGCATCATCACAAAGTTACTGCCAGGACACCAAAATCACTTACACATACACAACACCAGCAAACTGTGGACCAGTTTCCTGCAATTCCAACCAGATTTCGAGTCCTAACTGTAAATGTGCATATCCATTCACAGGGACTATTTTCTTCAGAGCAATTGGTTTCTCAAACTATGATAACTCAACTTACTATCTGGCTCTTCAGCAGTCTCTCATGACTGCCTTTCAGTCCCAAAATTTACCTGTGGATTCAGTTTCTATCAGCAATCCGTTTACCAATGATGTCGGCTACTTTGCATTGAGCCTCGCAATTTTCCCTTCACAACAAGATCGGTTTAATAGAACCACAGTAATAAGTCTTGGTTCTGTTCTCAACAGCCAGATTGTCAAACCTCCAAAATTTTTGAGACCTTACTATTTCATTGCCAACAATTATGAATACTATGCAGGAGAATCCTCTGTGTCAAAGAAGTCATCAAACAAGGGAATTATAGCTGGTACAGTATCTGGAATTGCTGTCAGTCTGCTATTAGCAACTTTTTTTGGGGTATACGCATTCCAAAAGAAGAAGAGAGCAGAAAAATCAATGGAAATGAACCCTTTTGCACACTGGAAAATGGACAAGAACAATGGGAATGCTCCTCAGTTGAAAGCAGCAAGATGGTTTTCATTTGAAGAGCTTAGCAAATACACCAACAATTTTTCAGATGCAAATGATGTTGGAGCTGGGGGATATGGCAAGGTTTATCGAGGTACACTTCCCTCTGGCGAAGTAGTTGCCATTAAAAGGGCCAGGCAAGAATCCATGCAAGGTGCGCTGGAGTTTAAAACTGAGATTGAACTTCTATCAAGAGTCCACCATAAGAATCTAGTTGGTCTTGTGGGTTTCTGCTTTGAGAAAGGTGAACAGATTCTGGTATATGAGTACATCTCTAAAGGAACTCTAATGGACAGTCTTTTAGGAAAATCTGCGACGAGATTGGATTGGAAGAAGAGGTTAAGTGTGACATTGGGGGCTGCGAGAGGACTGTCTTATCTTCATGAACTTGCCAACCCACCTATTATACATAGAGACGTCAAATCAGGCAATATCCTACTTGATGAGCAGCTAAATGCGAAAGTTGCAGATTTCGGATTGTCTAAGCCTTTTGCTGATGCTGATAGAACTCACATCACCACTCAAGTTAAAGGAACAATGGGATACTTGGATCCTGAATATTACATGACGACACAGTTGACTGAGAAGAGTGATGTTTATAGCTTTGGAGTGGTGATGCTTGAGCTGATTACAGCAAGAAAGCCAATAGAGCATGGAACATATATTGTGAGGGAGATCTTAAAGGTGCTGGACAGGTCAAAAAAGCTGTACAACCTTCATGACATTATTGATCCATACATAAGAGGAACAGACCTCAAAGGCTTGGAGAAGTTCTTTGATCTTGCTATGAGGTGTGTCAACGAATCGGGAGACAAGAGACCTACAATGGCTGAGGTGGTAAAAGAGATTGAGGATATAATGCAGCTCGTGGGCTTGTACCCCAGTACTGAATCATCATCATCCATTACAAAGCCTAAAACTGTAGCAACTCATGAAAGTATCCATGATTCTGTGGAGGATTTCAGTTATAGTGGGGGTTTCCCATCCATGAAGATAGAACCCCTCTGA | 2568 | 0.4151 | MDRSTQVVLLVLFFKFLAVAAQTTDPQDFGALRGLIDNWQNTPPNWVGTDPCGTGWAGISCTNSRVTSITLPNMDLEGKITADILKITELLTLDLSNNQGLGGTIPQGIGSLKKLTTLILVGCNFVGPIPDSIGSLKQMTFLALNSNKFSGPIPPSIGNLLNLTWLDLSDNELEGPIPVSDENSPGVDMLVKTLHLLLNNNQLNGSIPLSLGTVKSLQVVRLDGNQLSGVVPLSISELANLNELHLSNNKLNGSLPDLSGMNQLNYVIMQNTGLQGEIPVSIFNLTNLESVLFGNPICLETGASSQSYCQDTKITYTYTTPANCGPVSCNSNQISSPNCKCAYPFTGTIFFRAIGFSNYDNSTYYLALQQSLMTAFQSQNLPVDSVSISNPFTNDVGYFALSLAIFPSQQDRFNRTTVISLGSVLNSQIVKPPKFLRPYYFIANNYEYYAGESSVSKKSSNKGIIAGTVSGIAVSLLLATFFGVYAFQKKKRAEKSMEMNPFAHWKMDKNNGNAPQLKAARWFSFEELSKYTNNFSDANDVGAGGYGKVYRGTLPSGEVVAIKRARQESMQGALEFKTEIELLSRVHHKNLVGLVGFCFEKGEQILVYEYISKGTLMDSLLGKSATRLDWKKRLSVTLGAARGLSYLHELANPPIIHRDVKSGNILLDEQLNAKVADFGLSKPFADADRTHITTQVKGTMGYLDPEYYMTTQLTEKSDVYSFGVVMLELITARKPIEHGTYIVREILKVLDRSKKLYNLHDIIDPYIRGTDLKGLEKFFDLAMRCVNESGDKRPTMAEVVKEIEDIMQLVGLYPSTESSSSITKPKTVATHESIHDSVEDFSYSGGFPSMKIEPL* | 856 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte18g00292 | 855 | CDD | STKc_IRAK | 541 | 806 | - | - | |
Pte18g00292 | 855 | Gene3D | Phosphorylase Kinase; domain 1 | 505 | 610 | - | - | |
Pte18g00292 | 855 | SUPERFAMILY | Protein kinase-like (PK-like) | 521 | 823 | IPR011009 | - | |
Pte18g00292 | 855 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 655 | 667 | IPR008271 | GO:0004672|GO:0006468 | |
Pte18g00292 | 855 | ProSiteProfiles | Leucine-rich repeat profile. | 240 | 262 | IPR001611 | GO:0005515 | |
Pte18g00292 | 855 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 14 | 831 | - | - | |
Pte18g00292 | 855 | ProSiteProfiles | Protein kinase domain profile. | 535 | 807 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte18g00292 | 855 | PRINTS | Leucine-rich repeat signature | 163 | 176 | - | - | |
Pte18g00292 | 855 | PRINTS | Leucine-rich repeat signature | 238 | 251 | - | - | |
Pte18g00292 | 855 | Gene3D | Ribonuclease Inhibitor | 186 | 297 | IPR032675 | - | |
Pte18g00292 | 855 | ProSitePatterns | Protein kinases ATP-binding region signature. | 541 | 563 | IPR017441 | GO:0005524 | |
Pte18g00292 | 855 | FunFam | Leucine-rich repeat family protein | 27 | 182 | - | - | |
Pte18g00292 | 855 | Gene3D | Transferase(Phosphotransferase) domain 1 | 611 | 814 | - | - | |
Pte18g00292 | 855 | FunFam | Leucine-rich repeat protein kinase family protein | 502 | 610 | - | - | |
Pte18g00292 | 855 | Gene3D | Ribonuclease Inhibitor | 17 | 185 | IPR032675 | - | |
Pte18g00292 | 855 | Pfam | Protein tyrosine and serine/threonine kinase | 539 | 802 | IPR001245 | GO:0004672|GO:0006468 | |
Pte18g00292 | 855 | SMART | serkin_6 | 535 | 810 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte18g00292 | 855 | SUPERFAMILY | L domain-like | 31 | 296 | - | - | |
Pte18g00292 | 855 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 611 | 819 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte18g00292 | Pte-Chr18 | 5438759 | 5444201 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte18g00292 | 3 | 854 | Receptor kinase-like Gene Family | AT5G49760 | 47.534 | 0.0 | 792 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Pte18g00292 | PK_Tyr_Ser-Thr | 8.1e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte18g00292 | - | - | gmx:100786172 | 988.023 |