Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00292 ATGGATAGAAGTACTCAAGTGGTTCTACTAGTTCTTTTCTTCAAGTTTCTGGCCGTTGCAGCACAGACCACAGATCCTCAAGACTTTGGTGCTTTAAGGGGTCTAATTGATAATTGGCAAAACACACCACCAAATTGGGTGGGAACAGATCCTTGTGGAACTGGTTGGGCAGGAATCAGCTGCACCAATTCAAGGGTGACGTCCATAACACTGCCAAACATGGACTTGGAGGGCAAAATAACAGCAGATATCCTGAAAATAACTGAATTACTAACTCTTGATCTTTCTAACAATCAAGGCCTAGGAGGAACAATTCCACAAGGAATAGGAAGTTTGAAGAAGCTAACCACCTTAATTCTGGTCGGTTGCAATTTCGTCGGCCCCATTCCAGATTCAATTGGATCTTTGAAACAGATGACATTTCTAGCACTTAACTCCAACAAATTCAGTGGACCGATACCTCCAAGTATTGGCAATCTATTAAATCTTACATGGCTAGATCTTTCTGATAATGAACTTGAGGGGCCAATCCCAGTTTCTGATGAAAACTCACCTGGTGTAGATATGCTGGTGAAGACTCTTCATTTGCTCCTGAATAACAACCAGCTAAATGGATCCATTCCCTTGTCTCTAGGAACAGTGAAATCCTTGCAAGTGGTGCGTTTGGATGGGAACCAATTGAGTGGAGTAGTGCCTTTAAGTATCAGCGAACTTGCAAACCTCAATGAACTTCATTTATCAAACAACAAGCTCAATGGATCTCTGCCTGACCTAAGTGGCATGAATCAGCTCAACTATGTAATAATGCAGAACACGGGACTCCAAGGGGAAATTCCTGTTTCCATATTCAATCTCACAAATTTAGAGTCTGTACTGTTTGGGAATCCAATATGTTTGGAAACAGGAGCATCATCACAAAGTTACTGCCAGGACACCAAAATCACTTACACATACACAACACCAGCAAACTGTGGACCAGTTTCCTGCAATTCCAACCAGATTTCGAGTCCTAACTGTAAATGTGCATATCCATTCACAGGGACTATTTTCTTCAGAGCAATTGGTTTCTCAAACTATGATAACTCAACTTACTATCTGGCTCTTCAGCAGTCTCTCATGACTGCCTTTCAGTCCCAAAATTTACCTGTGGATTCAGTTTCTATCAGCAATCCGTTTACCAATGATGTCGGCTACTTTGCATTGAGCCTCGCAATTTTCCCTTCACAACAAGATCGGTTTAATAGAACCACAGTAATAAGTCTTGGTTCTGTTCTCAACAGCCAGATTGTCAAACCTCCAAAATTTTTGAGACCTTACTATTTCATTGCCAACAATTATGAATACTATGCAGGAGAATCCTCTGTGTCAAAGAAGTCATCAAACAAGGGAATTATAGCTGGTACAGTATCTGGAATTGCTGTCAGTCTGCTATTAGCAACTTTTTTTGGGGTATACGCATTCCAAAAGAAGAAGAGAGCAGAAAAATCAATGGAAATGAACCCTTTTGCACACTGGAAAATGGACAAGAACAATGGGAATGCTCCTCAGTTGAAAGCAGCAAGATGGTTTTCATTTGAAGAGCTTAGCAAATACACCAACAATTTTTCAGATGCAAATGATGTTGGAGCTGGGGGATATGGCAAGGTTTATCGAGGTACACTTCCCTCTGGCGAAGTAGTTGCCATTAAAAGGGCCAGGCAAGAATCCATGCAAGGTGCGCTGGAGTTTAAAACTGAGATTGAACTTCTATCAAGAGTCCACCATAAGAATCTAGTTGGTCTTGTGGGTTTCTGCTTTGAGAAAGGTGAACAGATTCTGGTATATGAGTACATCTCTAAAGGAACTCTAATGGACAGTCTTTTAGGAAAATCTGCGACGAGATTGGATTGGAAGAAGAGGTTAAGTGTGACATTGGGGGCTGCGAGAGGACTGTCTTATCTTCATGAACTTGCCAACCCACCTATTATACATAGAGACGTCAAATCAGGCAATATCCTACTTGATGAGCAGCTAAATGCGAAAGTTGCAGATTTCGGATTGTCTAAGCCTTTTGCTGATGCTGATAGAACTCACATCACCACTCAAGTTAAAGGAACAATGGGATACTTGGATCCTGAATATTACATGACGACACAGTTGACTGAGAAGAGTGATGTTTATAGCTTTGGAGTGGTGATGCTTGAGCTGATTACAGCAAGAAAGCCAATAGAGCATGGAACATATATTGTGAGGGAGATCTTAAAGGTGCTGGACAGGTCAAAAAAGCTGTACAACCTTCATGACATTATTGATCCATACATAAGAGGAACAGACCTCAAAGGCTTGGAGAAGTTCTTTGATCTTGCTATGAGGTGTGTCAACGAATCGGGAGACAAGAGACCTACAATGGCTGAGGTGGTAAAAGAGATTGAGGATATAATGCAGCTCGTGGGCTTGTACCCCAGTACTGAATCATCATCATCCATTACAAAGCCTAAAACTGTAGCAACTCATGAAAGTATCCATGATTCTGTGGAGGATTTCAGTTATAGTGGGGGTTTCCCATCCATGAAGATAGAACCCCTCTGA 2568 0.4151 MDRSTQVVLLVLFFKFLAVAAQTTDPQDFGALRGLIDNWQNTPPNWVGTDPCGTGWAGISCTNSRVTSITLPNMDLEGKITADILKITELLTLDLSNNQGLGGTIPQGIGSLKKLTTLILVGCNFVGPIPDSIGSLKQMTFLALNSNKFSGPIPPSIGNLLNLTWLDLSDNELEGPIPVSDENSPGVDMLVKTLHLLLNNNQLNGSIPLSLGTVKSLQVVRLDGNQLSGVVPLSISELANLNELHLSNNKLNGSLPDLSGMNQLNYVIMQNTGLQGEIPVSIFNLTNLESVLFGNPICLETGASSQSYCQDTKITYTYTTPANCGPVSCNSNQISSPNCKCAYPFTGTIFFRAIGFSNYDNSTYYLALQQSLMTAFQSQNLPVDSVSISNPFTNDVGYFALSLAIFPSQQDRFNRTTVISLGSVLNSQIVKPPKFLRPYYFIANNYEYYAGESSVSKKSSNKGIIAGTVSGIAVSLLLATFFGVYAFQKKKRAEKSMEMNPFAHWKMDKNNGNAPQLKAARWFSFEELSKYTNNFSDANDVGAGGYGKVYRGTLPSGEVVAIKRARQESMQGALEFKTEIELLSRVHHKNLVGLVGFCFEKGEQILVYEYISKGTLMDSLLGKSATRLDWKKRLSVTLGAARGLSYLHELANPPIIHRDVKSGNILLDEQLNAKVADFGLSKPFADADRTHITTQVKGTMGYLDPEYYMTTQLTEKSDVYSFGVVMLELITARKPIEHGTYIVREILKVLDRSKKLYNLHDIIDPYIRGTDLKGLEKFFDLAMRCVNESGDKRPTMAEVVKEIEDIMQLVGLYPSTESSSSITKPKTVATHESIHDSVEDFSYSGGFPSMKIEPL* 856
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00292 855 CDD STKc_IRAK 541 806 - -
Pte18g00292 855 Gene3D Phosphorylase Kinase; domain 1 505 610 - -
Pte18g00292 855 SUPERFAMILY Protein kinase-like (PK-like) 521 823 IPR011009 -
Pte18g00292 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Pte18g00292 855 ProSiteProfiles Leucine-rich repeat profile. 240 262 IPR001611 GO:0005515
Pte18g00292 855 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 831 - -
Pte18g00292 855 ProSiteProfiles Protein kinase domain profile. 535 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00292 855 PRINTS Leucine-rich repeat signature 163 176 - -
Pte18g00292 855 PRINTS Leucine-rich repeat signature 238 251 - -
Pte18g00292 855 Gene3D Ribonuclease Inhibitor 186 297 IPR032675 -
Pte18g00292 855 ProSitePatterns Protein kinases ATP-binding region signature. 541 563 IPR017441 GO:0005524
Pte18g00292 855 FunFam Leucine-rich repeat family protein 27 182 - -
Pte18g00292 855 Gene3D Transferase(Phosphotransferase) domain 1 611 814 - -
Pte18g00292 855 FunFam Leucine-rich repeat protein kinase family protein 502 610 - -
Pte18g00292 855 Gene3D Ribonuclease Inhibitor 17 185 IPR032675 -
Pte18g00292 855 Pfam Protein tyrosine and serine/threonine kinase 539 802 IPR001245 GO:0004672|GO:0006468
Pte18g00292 855 SMART serkin_6 535 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00292 855 SUPERFAMILY L domain-like 31 296 - -
Pte18g00292 855 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 611 819 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte18g00292 Pte-Chr18 5438759 5444201 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00292 3 854 Receptor kinase-like Gene Family AT5G49760 47.534 0.0 792
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pte18g00292 PK_Tyr_Ser-Thr 8.1e-47 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00292 - - gmx:100786172 988.023